RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 RNF125Q96EQ8 232 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 C16orf92Q96LL3 132 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 TRGV9Q99603 122 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 NXT2Q9NPJ8 142 aaKnown RBP11.94□□□□□ -0.5
VPS36-207ENST00000611132 DPM2O94777 84 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 CACNA1HO95180 2353 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 SPAARA0A1B0GVQ0 90 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 ESDP10768 282 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 BCL6BQ8N143 479 aaPredicted RBP11.93□□□□□ -0.5
VPS36-207ENST00000611132 METTL26Q96S19 204 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 H7C2G1 150 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 ZNF479Q96JC4 524 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 C17orf100A8MU93 164 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 GFRA4Q9GZZ7 299 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 GOLGB1Q14789 3259 aaKnown RBP11.93□□□□□ -0.5
VPS36-207ENST00000611132 SPTBN2O15020 2390 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 PRR20EP86478 221 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 PRR20CP86479 221 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 PRR20DP86480 221 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 PRR20BP86481 221 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 PRR20AP86496 221 aa11.93□□□□□ -0.5
VPS36-207ENST00000611132 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 KRTAP27-1Q3LI81 207 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 Q5PR19 223 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 ZNF883P0CG24 379 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 CDKN1BP46527 198 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 TMPRSS3P57727 454 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 CT83Q5H943 113 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 CRIP3Q6Q6R5 217 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 YLPM1P49750 1951 aaKnown RBP11.92□□□□□ -0.5
VPS36-207ENST00000611132 PMS2P5A8MQ11 134 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 PAX2Q02962 417 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
VPS36-207ENST00000611132 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
VPS36-207ENST00000611132 ZNF71Q9NQZ8 489 aaPredicted RBP11.92□□□□□ -0.5
VPS36-207ENST00000611132 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.91□□□□□ -0.5
VPS36-207ENST00000611132 DKK1O94907 266 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 IGHV1-46P01743 117 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 IGKCP01834 107 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 SLC25A39Q9BZJ4 359 aaPredicted RBP11.91□□□□□ -0.5
VPS36-207ENST00000611132 IGLC7A0M8Q6 106 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 H0YJW9 148 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 FREM1Q5H8C1 2179 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 NDUFA3O95167 84 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 ZNF492Q9P255 531 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 DLX6P56179 175 aa11.91□□□□□ -0.5
VPS36-207ENST00000611132 LYZL1Q6UWQ5 148 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 RAXQ9Y2V3 346 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 C15orf65H3BRN8 121 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 SMAD7O15105 426 aaKnown RBP11.9□□□□□ -0.5
VPS36-207ENST00000611132 BVES-AS1Q5T3Y7 98 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 TMEM133Q9H2Q1 129 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 IGKV3-15P01624 115 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 PRB4P10163 310 aaPredicted RBP11.9□□□□□ -0.5
VPS36-207ENST00000611132 FXYD7P58549 80 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 TMEM105Q8N8V8 129 aa11.9□□□□□ -0.5
VPS36-207ENST00000611132 RNASE8Q8TDE3 154 aaKnown RBP11.9□□□□□ -0.5
VPS36-207ENST00000611132 LSM4Q9Y4Z0 139 aaKnown RBP11.9□□□□□ -0.5
VPS36-207ENST00000611132 Q86TA4 180 aa11.9□□□□□ -0.51
VPS36-207ENST00000611132 SLC25A2Q9BXI2 301 aa11.9□□□□□ -0.51
VPS36-207ENST00000611132 DPM3Q9P2X0 92 aa11.9□□□□□ -0.51
VPS36-207ENST00000611132 NCR2O95944 276 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 CD24P25063 80 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
VPS36-207ENST00000611132 SMPXQ9UHP9 88 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 APOMO95445 188 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 ARMS2P0C7Q2 107 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
VPS36-207ENST00000611132 LGALS3P17931 250 aaKnown RBP11.89□□□□□ -0.51
VPS36-207ENST00000611132 CEACAM8P31997 349 aaPredicted RBP11.89□□□□□ -0.51
VPS36-207ENST00000611132 IFI27P40305 119 aaPredicted RBP11.89□□□□□ -0.51
VPS36-207ENST00000611132 IGHV3-23P01764 117 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 COX6CP09669 75 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 FAM106CPP0CH98 169 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 GAGE13Q4V321 117 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 Q6ZPA2 131 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 MDS2Q8NDY4 140 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 GTSF1LQ9H1H1 148 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 H3BRM9 83 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 LOXL3P58215 753 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 LINC01559Q495D7 138 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 TTC32Q5I0X7 151 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
VPS36-207ENST00000611132 FAM168AQ92567 244 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 COX8AP10176 69 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 EBLN2Q6P2I7 272 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 IGHV3OR16-8A0A075B7F1 116 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 NPIPB5A8MRT5 1133 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms