RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 IGKV1D-43A0A0B4J1Z2 117 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 C2orf74A8MZ97 194 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 E7EQL1 145 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 FABP1P07148 127 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 BPGMP07738 259 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 HLA-DMBP28068 263 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 GABRA4P48169 554 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 RPL18Q07020 188 aaKnown RBP2.77□□□□□ -1.97
LINC00458-206ENST00000607494 IBA57Q5T440 356 aaKnown RBP2.77□□□□□ -1.97
LINC00458-206ENST00000607494 LHFPL1Q86WI0 220 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 SLC7A6Q92536 515 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 HOPXQ9BPY8 73 aaPredicted RBP2.77□□□□□ -1.97
LINC00458-206ENST00000607494 DERL1Q9BUN8 251 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 PARVBQ9HBI1 364 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 TP73-AS1Q9UF72 201 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 MYH7BA7E2Y1 1941 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 DCHS1Q96JQ0 3298 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 PLXNA4Q9HCM2 1894 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 CHD6Q8TD26 2715 aa2.77□□□□□ -1.97
LINC00458-206ENST00000607494 OTOGLQ3ZCN5 2332 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 PLIN4Q96Q06 1357 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 SHROOM3Q8TF72 1996 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 GGT3PA6NGU5 568 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 C5orf67F2Z3F1 127 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 IFNA1P01562 189 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 IFNA10P01566 189 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 OR4E1P0C645 316 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 GZMHP20718 246 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 PPIBP23284 216 aaKnown RBP2.76□□□□□ -1.97
LINC00458-206ENST00000607494 CCR2P41597 374 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 ZNF705AQ6ZN79 300 aaPredicted RBP2.76□□□□□ -1.97
LINC00458-206ENST00000607494 Q6ZS52 159 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 GOLT1AQ6ZVE7 132 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 IMMP2LQ96T52 175 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 OR8D2Q9GZM6 311 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 USP24Q9UPU5 2620 aa2.76□□□□□ -1.97
LINC00458-206ENST00000607494 WDR87Q6ZQQ6 2873 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 DOCK5Q9H7D0 1870 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 FANCMQ8IYD8 2048 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 FABP5P3A8MUU1 101 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 CREBL2O60519 120 aaPredicted RBP2.75□□□□□ -1.97
LINC00458-206ENST00000607494 ATG12O94817 140 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 IGHV3-7P01780 117 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 ERP29P30040 261 aaKnown RBP2.75□□□□□ -1.97
LINC00458-206ENST00000607494 TPI1P60174 286 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 MEF2BQ02080 365 aaPredicted RBP2.75□□□□□ -1.97
LINC00458-206ENST00000607494 FOXF1Q12946 379 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 MOGQ16653 247 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 ARHGAP11BQ3KRB8 267 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 FAM172AQ8WUF8 416 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 H1FXQ92522 213 aaKnown RBP2.75□□□□□ -1.97
LINC00458-206ENST00000607494 C20orf166-AS1Q96NR2 134 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 BOLA2Q9H3K6 86 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 TUBA4BQ9H853 241 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 PYCARDQ9ULZ3 195 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 CYSLTR1Q9Y271 337 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 TIMM22Q9Y584 194 aa2.75□□□□□ -1.97
LINC00458-206ENST00000607494 DMXL1Q9Y485 3027 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 CHD8Q9HCK8 2581 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 IRGMA1A4Y4 181 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 TRAPPC13A5PLN9 417 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 H3BT86 120 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 PGRMC1O00264 195 aaKnown RBP2.74□□□□□ -1.97
LINC00458-206ENST00000607494 ZNF73O43830 326 aaPredicted RBP2.74□□□□□ -1.97
LINC00458-206ENST00000607494 SULT1A3P0DMM9 295 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 SULT1A4P0DMN0 295 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 MSNP26038 577 aaKnown RBP2.74□□□□□ -1.97
LINC00458-206ENST00000607494 PSMB8P28062 276 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 RPL28P46779 137 aaKnown RBP2.74□□□□□ -1.97
LINC00458-206ENST00000607494 RAB14P61106 215 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 DR1Q01658 176 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 TAF9Q16594 264 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 ZNF767PQ75MW2 155 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 SLC35E3Q7Z769 313 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 GPR146Q96CH1 333 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 CCL26Q9Y258 94 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 UTP11Q9Y3A2 253 aaKnown RBP2.74□□□□□ -1.97
LINC00458-206ENST00000607494 PKD1L2Q7Z442 2459 aa2.74□□□□□ -1.97
LINC00458-206ENST00000607494 NYNRINQ9P2P1 1898 aaKnown RBP2.73□□□□□ -1.97
LINC00458-206ENST00000607494 ZNF407Q9C0G0 2248 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 VPS13AQ96RL7 3174 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 HMGB3O15347 200 aaKnown RBP2.73□□□□□ -1.97
LINC00458-206ENST00000607494 S1PR2O95136 353 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 C1QBP02746 253 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 MSMBP08118 114 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 LGALS1P09382 135 aaKnown RBP2.73□□□□□ -1.97
LINC00458-206ENST00000607494 SMIM17P0DL12 118 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 EMP1P54849 157 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 PABPC1L2AQ5JQF8 200 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 TRIQKQ629K1 86 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 HCP5Q6MZN7 132 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 Q6Q795 121 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 AGTRAPQ6RW13 159 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 LYZL1Q6UWQ5 148 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 DYNAPQ8N1N2 210 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 OR51T1Q8NGJ9 327 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 OR5J2Q8NH18 312 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 PPTC7Q8NI37 304 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 SLC25A40Q8TBP6 338 aa2.73□□□□□ -1.97
LINC00458-206ENST00000607494 C2orf50Q96LR7 162 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms