RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SSSCA1O60232 199 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 HLA-DRB4P13762 266 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 PSMB3P49720 205 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 CSNK1G2-AS1Q8NCQ2 148 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.3
CCDC12-208ENST00000603885 PSENENQ9NZ42 101 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 TBC1D24Q9ULP9 559 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 SLC45A2Q9UMX9 530 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 HLA-DRB4X5D2U9 266 aa13.15□□□□□ -0.3
CCDC12-208ENST00000603885 SAMD13Q5VXD3 122 aa13.14□□□□□ -0.31
CCDC12-208ENST00000603885 LINC00052Q96N35 136 aa13.14□□□□□ -0.31
CCDC12-208ENST00000603885 HRH4Q9H3N8 390 aa13.14□□□□□ -0.31
CCDC12-208ENST00000603885 X6R8D5 127 aa13.14□□□□□ -0.31
CCDC12-208ENST00000603885 SMCO3A2RU48 225 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 SOCS3O14543 225 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 RBMY1A1P0DJD3 496 aaKnown RBP13.13□□□□□ -0.31
CCDC12-208ENST00000603885 RBMY1CP0DJD4 496 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 S100A7P31151 101 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 GALR1P47211 349 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 RBMY1FQ15415 496 aaKnown RBP13.13□□□□□ -0.31
CCDC12-208ENST00000603885 IAH1Q2TAA2 248 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-208ENST00000603885 FOXI2Q6ZQN5 318 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 TMEM144Q7Z5S9 345 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 MITD1Q8WV92 249 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 SMIM8Q96KF7 97 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 C20orf85Q9H1P6 137 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 XCL2Q9UBD3 114 aa13.13□□□□□ -0.31
CCDC12-208ENST00000603885 EPPK1P58107 5090 aaKnown RBP13.12□□□□□ -0.31
CCDC12-208ENST00000603885 ISLRO14498 428 aa13.12□□□□□ -0.31
CCDC12-208ENST00000603885 LYRM1O43325 122 aa13.12□□□□□ -0.31
CCDC12-208ENST00000603885 SCGB1D2O95969 90 aa13.12□□□□□ -0.31
CCDC12-208ENST00000603885 ORM2P19652 201 aa13.12□□□□□ -0.31
CCDC12-208ENST00000603885 GATA2P23769 480 aaPredicted RBP13.12□□□□□ -0.31
CCDC12-208ENST00000603885 MEOX2P50222 304 aa13.12□□□□□ -0.31
CCDC12-208ENST00000603885 TMEM147Q9BVK8 224 aa13.12□□□□□ -0.31
CCDC12-208ENST00000603885 SAV1Q9H4B6 383 aaPredicted RBP13.12□□□□□ -0.31
CCDC12-208ENST00000603885 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
CCDC12-208ENST00000603885 ZNF98A6NK75 572 aa13.11□□□□□ -0.31
CCDC12-208ENST00000603885 PLA2G10O15496 165 aa13.11□□□□□ -0.31
CCDC12-208ENST00000603885 GDF5OSQ5U4N7 250 aa13.11□□□□□ -0.31
CCDC12-208ENST00000603885 TMEM182Q6ZP80 229 aaPredicted RBP13.11□□□□□ -0.31
CCDC12-208ENST00000603885 ZBTB8BQ8NAP8 495 aaPredicted RBP13.11□□□□□ -0.31
CCDC12-208ENST00000603885 OR1B1Q8NGR6 318 aa13.11□□□□□ -0.31
CCDC12-208ENST00000603885 C2CD4CQ8TF44 421 aa13.11□□□□□ -0.31
CCDC12-208ENST00000603885 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
CCDC12-208ENST00000603885 PMS2P5A8MQ11 134 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 C11orf94C9JXX5 98 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 IL5P05113 134 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 PAX9P55771 341 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 TAS2R30P59541 319 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 DEFB1P60022 68 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 DLK1P80370 383 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 SPATA31B1PQ5VZV4 182 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 TMEM14EPQ6UXP3 125 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 CYP2G1PQ6ZSU1 146 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 C16orf92Q96LL3 132 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 GPR82Q96P67 336 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 GSKIPQ9P0R6 139 aa13.1□□□□□ -0.31
CCDC12-208ENST00000603885 ELOA3CA0A087WX78 387 aaPredicted RBP13.09□□□□□ -0.31
CCDC12-208ENST00000603885 TSC22D2O75157 780 aa13.09□□□□□ -0.31
CCDC12-208ENST00000603885 METTL15P1P0C7V9 234 aa13.09□□□□□ -0.31
CCDC12-208ENST00000603885 RRAS2P62070 204 aaPredicted RBP13.09□□□□□ -0.31
CCDC12-208ENST00000603885 EBLN2Q6P2I7 272 aa13.09□□□□□ -0.31
CCDC12-208ENST00000603885 OR10P1Q8NGE3 313 aa13.09□□□□□ -0.31
CCDC12-208ENST00000603885 CLUHP3Q96NS8 147 aa13.09□□□□□ -0.31
CCDC12-208ENST00000603885 RSG1Q9BU20 258 aa13.09□□□□□ -0.31
CCDC12-208ENST00000603885 RPRMQ9NS64 109 aa13.09□□□□□ -0.31
CCDC12-208ENST00000603885 FNDC10F2Z333 226 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 CCNKO75909 580 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 TCRBP04435 133 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 HLA-DMBP28068 263 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 TCTAP57738 103 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 RAP2BP61225 183 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 SELENOTP62341 195 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 LGALS9CQ6DKI2 356 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 GSG1LQ6UXU4 331 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 OR4B1Q8NGF8 309 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 CCDC32Q9BV29 185 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 DOK5Q9P104 306 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 MGAT4CQ9UBM8 478 aa13.08□□□□□ -0.32
CCDC12-208ENST00000603885 RCL1Q9Y2P8 373 aaKnown RBP13.08□□□□□ -0.32
CCDC12-208ENST00000603885 KMT2AQ03164 3969 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 TRAV6A0A075B6T7 132 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 H3BRN7 92 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 LINC00869P0C866 280 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 ZNF846Q147U1 533 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 ZNF705AQ6ZN79 300 aaPredicted RBP13.07□□□□□ -0.32
CCDC12-208ENST00000603885 SCRT1Q9BWW7 348 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 SLC25A39Q9BZJ4 359 aaPredicted RBP13.07□□□□□ -0.32
CCDC12-208ENST00000603885 NPVFQ9HCQ7 196 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 NUDT15Q9NV35 164 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 HIGD1AQ9Y241 93 aa13.07□□□□□ -0.32
CCDC12-208ENST00000603885 A0A0J9YX75 114 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 F6UB75 175 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 CCSO14618 274 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 HYPMO75409 117 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 MBPP02686 304 aaPredicted RBP13.06□□□□□ -0.32
CCDC12-208ENST00000603885 FXYD7P58549 80 aa13.06□□□□□ -0.32
CCDC12-208ENST00000603885 PLP1P60201 277 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms