RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RCC1LQ96I51 464 aaKnown RBP14.28□□□□□ -0.12
SSBP4-212ENST00000601919 METTL26Q96S19 204 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 MRPL27Q9P0M9 148 aaKnown RBP14.28□□□□□ -0.12
SSBP4-212ENST00000601919 FUT9Q9Y231 359 aa14.28□□□□□ -0.12
SSBP4-212ENST00000601919 A0A1W2PRX2 142 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 HBE1P02100 147 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 FHITP49789 147 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 USF2Q15853 346 aaPredicted RBP14.27□□□□□ -0.13
SSBP4-212ENST00000601919 PATE2Q6UY27 113 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 C18orf65Q6ZTR6 163 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 C8orf86Q6ZUL3 223 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 LINC00305Q7Z4B0 112 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 TMEM190Q8WZ59 177 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 RAB24Q969Q5 203 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 NARS2Q96I59 477 aaKnown RBP14.27□□□□□ -0.13
SSBP4-212ENST00000601919 C20orf24Q9BUV8 137 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 SLC25A22Q9H936 323 aa14.27□□□□□ -0.13
SSBP4-212ENST00000601919 TECRQ9NZ01 308 aaKnown RBP14.27□□□□□ -0.13
SSBP4-212ENST00000601919 ZNF320A2RRD8 509 aa14.26□□□□□ -0.13
SSBP4-212ENST00000601919 NPPCP23582 126 aa14.26□□□□□ -0.13
SSBP4-212ENST00000601919 HOXD3P31249 432 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-212ENST00000601919 CLLU1Q5K131 121 aa14.26□□□□□ -0.13
SSBP4-212ENST00000601919 SLC25A39Q9BZJ4 359 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-212ENST00000601919 UFC1Q9Y3C8 167 aa14.26□□□□□ -0.13
SSBP4-212ENST00000601919 SETD2Q9BYW2 2564 aaPredicted RBP14.25□□□□□ -0.13
SSBP4-212ENST00000601919 MAP1LC3B2A6NCE7 125 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 K7EMT4 169 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 LGALS9O00182 355 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 DEFB136Q30KP8 78 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 KHDC3LQ587J8 217 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 REC114Q7Z4M0 266 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 C1QL4Q86Z23 238 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 STXBP6Q8NFX7 210 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 SFT2D1Q8WV19 159 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 MBD3L1Q8WWY6 194 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 SHANK2-AS3Q9BTD1 123 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 MAP1LC3BQ9GZQ8 125 aa14.25□□□□□ -0.13
SSBP4-212ENST00000601919 SEPSECSQ9HD40 501 aaKnown RBP14.25□□□□□ -0.13
SSBP4-212ENST00000601919 TRAV1-1A0A0B4J248 108 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 CCL24O00175 119 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 NMBP08949 121 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 C8orf88P0DMB2 117 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 BMI1P35226 326 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 KRTAP10-3P60369 221 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 UHRF2Q96PU4 802 aa14.24□□□□□ -0.13
SSBP4-212ENST00000601919 DAZ1Q9NQZ3 744 aaKnown RBP14.24□□□□□ -0.13
SSBP4-212ENST00000601919 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 A0A1W2PS18 150 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 H3BRN7 92 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 CXorf1O96002 111 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 CRYBB3P26998 211 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 KLF5Q13887 457 aaPredicted RBP14.23□□□□□ -0.13
SSBP4-212ENST00000601919 ZNF726P1Q15940 193 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 NSUN5P1Q3KNT7 163 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 LCN15Q6UWW0 184 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 UNQ9165/PRO28630Q6UXU0 137 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 PQLC2Q6ZP29 291 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 MIR17HGQ75NE6 70 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 RAX2Q96IS3 184 aa14.23□□□□□ -0.13
SSBP4-212ENST00000601919 ZNF98A6NK75 572 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 STAG3L2P0CL84 134 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 STAG3L3P0CL85 134 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 MYCNOSP40205 109 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 SYNJ2BPP57105 145 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 FHL3Q13643 280 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 C1orf194Q5T5A4 169 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 GRAMD2BQ96HH9 432 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 CITED1Q99966 193 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 TMEM231Q9H6L2 316 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 PEMTQ9UBM1 199 aa14.22□□□□□ -0.13
SSBP4-212ENST00000601919 ADARB2-AS1A8MUL3 147 aa14.21□□□□□ -0.13
SSBP4-212ENST00000601919 A8MWP6 167 aa14.21□□□□□ -0.13
SSBP4-212ENST00000601919 HMGB3O15347 200 aaKnown RBP14.21□□□□□ -0.13
SSBP4-212ENST00000601919 SLURP1P55000 103 aa14.21□□□□□ -0.13
SSBP4-212ENST00000601919 SPATA31B1PQ5VZV4 182 aa14.21□□□□□ -0.13
SSBP4-212ENST00000601919 GPR82Q96P67 336 aa14.21□□□□□ -0.13
SSBP4-212ENST00000601919 SCRT1Q9BWW7 348 aa14.21□□□□□ -0.13
SSBP4-212ENST00000601919 HRH4Q9H3N8 390 aa14.21□□□□□ -0.13
SSBP4-212ENST00000601919 ZNF207O43670 478 aaKnown RBP14.2□□□□□ -0.14
SSBP4-212ENST00000601919 OR7C2O60412 319 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 HIST2H2BDQ6DRA6 164 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 C12orf54Q6X4T0 127 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 IL34Q6ZMJ4 242 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 SSX7Q7RTT5 188 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 BPIFA4PQ86YQ2 179 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 OR4F17Q8NGA8 305 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 LYPD6BQ8NI32 183 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 PCNPQ8WW12 178 aaKnown RBP14.2□□□□□ -0.14
SSBP4-212ENST00000601919 MARC2Q969Z3 335 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 OR4F4Q96R69 305 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 SLC25A2Q9BXI2 301 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 U3KQE9 123 aa14.2□□□□□ -0.14
SSBP4-212ENST00000601919 IGHV7-4-1A0A0J9YVY3 117 aa14.19□□□□□ -0.14
SSBP4-212ENST00000601919 M0QZ24 198 aa14.19□□□□□ -0.14
SSBP4-212ENST00000601919 BUB3O43684 328 aa14.19□□□□□ -0.14
SSBP4-212ENST00000601919 ARL14EPLP0DKL9 152 aa14.19□□□□□ -0.14
SSBP4-212ENST00000601919 RPL7P18124 248 aaKnown RBP14.19□□□□□ -0.14
SSBP4-212ENST00000601919 PSMB3P49720 205 aa14.19□□□□□ -0.14
SSBP4-212ENST00000601919 PPT1P50897 306 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms