RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 MAGT1Q9H0U3 335 aa6.07□□□□□ -1.44
SHKBP1-220ENST00000599716 RBKSQ9H477 322 aa6.07□□□□□ -1.44
SHKBP1-220ENST00000599716 GOLT1BQ9Y3E0 138 aa6.07□□□□□ -1.44
SHKBP1-220ENST00000599716 TMED3Q9Y3Q3 217 aa6.07□□□□□ -1.44
SHKBP1-220ENST00000599716 TRAV12-2A0A075B6T6 113 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 A0A0J9YX75 114 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 NBDYA0A0U1RRE5 68 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 F5H768 121 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 GSTZ1O43708 216 aaPredicted RBP6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 GATA2P23769 480 aaPredicted RBP6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 PSMB3P49720 205 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 KLF9Q13886 244 aaPredicted RBP6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 GAMTQ14353 236 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 SPINK13Q1W4C9 94 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 AMTNQ6UX39 209 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 TMEM182Q6ZP80 229 aaPredicted RBP6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 LYZL2Q7Z4W2 148 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 BAP18Q8IXM2 172 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 LGI3Q8N145 548 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 RNF182Q8N6D2 247 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 TMEM229BQ8NBD8 167 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 ZNRF2Q8NHG8 242 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 DTD1Q8TEA8 209 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 FAM210BQ96KR6 192 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 UHRF2Q96PU4 802 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 TMEM208Q9BTX3 173 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 KRTAP1-5Q9BYS1 174 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 SLC25A39Q9BZJ4 359 aaPredicted RBP6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 MIXL1Q9H2W2 232 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 SLC25A22Q9H936 323 aa6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 C14orf166Q9Y224 244 aaKnown RBP6.06□□□□□ -1.44
SHKBP1-220ENST00000599716 IGKV1OR2-108A0A075B7D4 117 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 CRYM-AS1A6NIL9 109 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 CRXO43186 299 aaPredicted RBP6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 SULT1A3P0DMM9 295 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 SULT1A4P0DMN0 295 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 IAPPP10997 89 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 HTN1P15515 57 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 ID1P41134 155 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 TAS2R19P59542 299 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 DLK1P80370 383 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 GPR107Q5VW38 600 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 ETFRF1Q6IPR1 90 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 EBLN2Q6P2I7 272 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 SPATA12Q7Z6I5 190 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 FAM219AQ8IW50 185 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 OR8I2Q8N0Y5 310 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 C6orf223Q8N319 242 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 OR4C16Q8NGL9 310 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 C16orf92Q96LL3 132 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 RSG1Q9BU20 258 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 SLC25A32Q9H2D1 315 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 SEPSECSQ9HD40 501 aaKnown RBP6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 DOK5Q9P104 306 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 PAIP2BQ9ULR5 123 aaKnown RBP6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 LINC00588Q9Y4M8 146 aa6.05□□□□□ -1.44
SHKBP1-220ENST00000599716 A0A087WXM4 84 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 PLAC8L1A1L4L8 177 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 EPM2AB3EWF7 344 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 CNN1P51911 297 aaKnown RBP6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 PAX9P55771 341 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 SUPT4H1P63272 117 aaKnown RBP6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 OXA1LQ15070 435 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 OR8G2PQ6IF36 304 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 OR11H7Q8NGC8 314 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 OR51S1Q8NGJ8 323 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 RNF141Q8WVD5 230 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 IGF2BP2-AS1Q96M15 143 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 HSPB7Q9UBY9 170 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 GPR132Q9UNW8 380 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 TMEM56-RWDD3S4R434 201 aa6.04□□□□□ -1.44
SHKBP1-220ENST00000599716 TRAV8-2A0A0B4J237 113 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 TEX48A0A1B0GUV7 120 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 ISLRO14498 428 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 CTDSP2O14595 271 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 SNRPCP09234 159 aaKnown RBP6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 AKR1C4P17516 323 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 TBPP20226 339 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 LRP2P98164 4655 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 FGL1Q08830 312 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 SMCO1Q147U7 214 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 CTF1Q16619 201 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 XP32Q5T750 250 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 MZT2AQ6P582 158 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 C15orf53Q8NAA6 179 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 SLC35E1Q96K37 410 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 VCX3AQ9NNX9 186 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 RPRMQ9NS64 109 aa6.03□□□□□ -1.44
SHKBP1-220ENST00000599716 A0A0J9YY99 117 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 ZNF98A6NK75 572 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 SNRPGP15A8MWD9 76 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 DISC1C4P0D8 188 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 GABARAPH6UMI1 98 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 RGS5O15539 181 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 GABARAPO95166 117 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 ZNF182P17025 639 aaPredicted RBP6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 ORM2P19652 201 aa6.02□□□□□ -1.45
SHKBP1-220ENST00000599716 KIR3DS1Q14943 382 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms