RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 PMS2P11Q13670 270 aa16.54■□□□□ 0.24
CCDC9-204ENST00000599398 C12orf45Q8N5I9 185 aaPredicted RBP16.54■□□□□ 0.24
CCDC9-204ENST00000599398 TMEM217Q8N7C4 229 aa16.54■□□□□ 0.24
CCDC9-204ENST00000599398 WDR12Q9GZL7 423 aaKnown RBP16.54■□□□□ 0.24
CCDC9-204ENST00000599398 LCE6AA0A183 80 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 PMS2P5A8MQ11 134 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 SPP1P10451 314 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 TAS2R30P59541 319 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 ASAH1Q13510 395 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 MORN3Q6PF18 240 aaPredicted RBP16.53■□□□□ 0.24
CCDC9-204ENST00000599398 TMEM14EPQ6UXP3 125 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 TMEM182Q6ZP80 229 aaPredicted RBP16.53■□□□□ 0.24
CCDC9-204ENST00000599398 OR10P1Q8NGE3 313 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 SEPSECSQ9HD40 501 aaKnown RBP16.53■□□□□ 0.24
CCDC9-204ENST00000599398 PTTG2Q9NZH5 202 aa16.53■□□□□ 0.24
CCDC9-204ENST00000599398 L7N2F9 121 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 TSC22D2O75157 780 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 IL5P05113 134 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 VAMP2P63027 116 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 DLK1P80370 383 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 OR1B1Q8NGR6 318 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 TMEM147Q9BVK8 224 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 SLC25A22Q9H936 323 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 MGAT4CQ9UBM8 478 aa16.52■□□□□ 0.24
CCDC9-204ENST00000599398 LSM5Q9Y4Y9 91 aaKnown RBP16.52■□□□□ 0.24
CCDC9-204ENST00000599398 C7orf66A4D0T2 115 aa16.51■□□□□ 0.23
CCDC9-204ENST00000599398 ID1P41134 155 aa16.51■□□□□ 0.23
CCDC9-204ENST00000599398 CYP2G1PQ6ZSU1 146 aa16.51■□□□□ 0.23
CCDC9-204ENST00000599398 LINC00052Q96N35 136 aa16.51■□□□□ 0.23
CCDC9-204ENST00000599398 SLC45A2Q9UMX9 530 aa16.51■□□□□ 0.23
CCDC9-204ENST00000599398 LYSTQ99698 3801 aa16.51■□□□□ 0.23
CCDC9-204ENST00000599398 RYR2Q92736 4967 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 UPK1BO75841 260 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 C4BPBP20851 252 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 S100A7P31151 101 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 TMEM41BQ5BJD5 291 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 ENKURQ8TC29 256 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 NPVFQ9HCQ7 196 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 DOK5Q9P104 306 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 SACSQ9NZJ4 4579 aa16.5■□□□□ 0.23
CCDC9-204ENST00000599398 ZNF98A6NK75 572 aa16.49■□□□□ 0.23
CCDC9-204ENST00000599398 GIG44P09565 113 aaPredicted RBP16.49■□□□□ 0.23
CCDC9-204ENST00000599398 GALR1P47211 349 aa16.49■□□□□ 0.23
CCDC9-204ENST00000599398 GSG1LQ6UXU4 331 aa16.49■□□□□ 0.23
CCDC9-204ENST00000599398 SLC25A32Q9H2D1 315 aa16.49■□□□□ 0.23
CCDC9-204ENST00000599398 K7EPK0 472 aa16.48■□□□□ 0.23
CCDC9-204ENST00000599398 JTBO76095 146 aa16.48■□□□□ 0.23
CCDC9-204ENST00000599398 ATF4P18848 351 aaPredicted RBP16.48■□□□□ 0.23
CCDC9-204ENST00000599398 PSMB3P49720 205 aa16.48■□□□□ 0.23
CCDC9-204ENST00000599398 BCAP31P51572 246 aa16.48■□□□□ 0.23
CCDC9-204ENST00000599398 C2orf50Q96LR7 162 aa16.48■□□□□ 0.23
CCDC9-204ENST00000599398 CLEC5AQ9NY25 188 aa16.48■□□□□ 0.23
CCDC9-204ENST00000599398 FNDC10F2Z333 226 aa16.47■□□□□ 0.23
CCDC9-204ENST00000599398 DEFB4AO15263 64 aa16.47■□□□□ 0.23
CCDC9-204ENST00000599398 LINC00869P0C866 280 aa16.47■□□□□ 0.23
CCDC9-204ENST00000599398 RAP2BP61225 183 aa16.47■□□□□ 0.23
CCDC9-204ENST00000599398 NUTF2P61970 127 aaKnown RBP16.47■□□□□ 0.23
CCDC9-204ENST00000599398 SELENOTP62341 195 aa16.47■□□□□ 0.23
CCDC9-204ENST00000599398 TEPPQ6URK8 271 aa16.47■□□□□ 0.23
CCDC9-204ENST00000599398 H3BMM0 161 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 SOCS3O14543 225 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 OR5G3P0C626 314 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 CAV2P51636 162 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 DEFB1P60022 68 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 S100A10P60903 97 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 ARL16Q0P5N6 197 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 RSG1Q9BU20 258 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 SCRT1Q9BWW7 348 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 C11orf68Q9H3H3 251 aaKnown RBP16.46■□□□□ 0.23
CCDC9-204ENST00000599398 HIGD1AQ9Y241 93 aa16.46■□□□□ 0.23
CCDC9-204ENST00000599398 NUPR2A6NF83 97 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 ISLRO14498 428 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 HYPMO75409 117 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 IGKV3-20P01619 116 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 HLA-DRB4P13762 266 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 PVALBP20472 110 aaPredicted RBP16.45■□□□□ 0.22
CCDC9-204ENST00000599398 MEOX2P50222 304 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 SLC38A11Q08AI6 406 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 SAMD13Q5VXD3 122 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 C16orf92Q96LL3 132 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 GPR82Q96P67 336 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 SLC25A39Q9BZJ4 359 aaPredicted RBP16.45■□□□□ 0.22
CCDC9-204ENST00000599398 GPN1Q9HCN4 374 aaPredicted RBP16.45■□□□□ 0.22
CCDC9-204ENST00000599398 HLA-DRB4X5D2U9 266 aa16.45■□□□□ 0.22
CCDC9-204ENST00000599398 H3BRN7 92 aa16.44■□□□□ 0.22
CCDC9-204ENST00000599398 IFITM3Q01628 133 aa16.44■□□□□ 0.22
CCDC9-204ENST00000599398 GDF5OSQ5U4N7 250 aa16.44■□□□□ 0.22
CCDC9-204ENST00000599398 GGACTQ9BVM4 153 aa16.44■□□□□ 0.22
CCDC9-204ENST00000599398 C1QTNF4Q9BXJ3 329 aa16.44■□□□□ 0.22
CCDC9-204ENST00000599398 ARL6Q9H0F7 186 aa16.44■□□□□ 0.22
CCDC9-204ENST00000599398 GOSR2O14653 212 aa16.43■□□□□ 0.22
CCDC9-204ENST00000599398 DEDDO75618 318 aa16.43■□□□□ 0.22
CCDC9-204ENST00000599398 FOXI2Q6ZQN5 318 aa16.43■□□□□ 0.22
CCDC9-204ENST00000599398 C11orf45Q8TAV5 145 aa16.43■□□□□ 0.22
CCDC9-204ENST00000599398 SHANK2-AS3Q9BTD1 123 aa16.43■□□□□ 0.22
CCDC9-204ENST00000599398 SAV1Q9H4B6 383 aaPredicted RBP16.43■□□□□ 0.22
CCDC9-204ENST00000599398 BATF3Q9NR55 127 aa16.43■□□□□ 0.22
CCDC9-204ENST00000599398 XCL2Q9UBD3 114 aa16.43■□□□□ 0.22
CCDC9-204ENST00000599398 FAM24AA6NFZ4 105 aa16.42■□□□□ 0.22
CCDC9-204ENST00000599398 CST7O76096 145 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms