RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 GATA2P23769 480 aaPredicted RBP10.93□□□□□ -0.66
LIG1-215ENST00000597901 ID1P41134 155 aa10.93□□□□□ -0.66
LIG1-215ENST00000597901 PAX9P55771 341 aa10.93□□□□□ -0.66
LIG1-215ENST00000597901 GSG1LQ6UXU4 331 aa10.93□□□□□ -0.66
LIG1-215ENST00000597901 X6R8D5 127 aa10.93□□□□□ -0.66
LIG1-215ENST00000597901 HYDINQ4G0P3 5121 aa10.93□□□□□ -0.66
LIG1-215ENST00000597901 PMS2P5A8MQ11 134 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 MIFP14174 115 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 ORM2P19652 201 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 DEFB1P60022 68 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 NUTF2P61970 127 aaKnown RBP10.92□□□□□ -0.66
LIG1-215ENST00000597901 TMEM144Q7Z5S9 345 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 BPIFCQ8NFQ6 507 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 MITD1Q8WV92 249 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 TBC1D24Q9ULP9 559 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 SLC45A2Q9UMX9 530 aa10.92□□□□□ -0.66
LIG1-215ENST00000597901 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 SOCS3O14543 225 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 HLA-DRB4P13762 266 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 AKR1C1Q04828 323 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 IAH1Q2TAA2 248 aaPredicted RBP10.91□□□□□ -0.66
LIG1-215ENST00000597901 GDF5OSQ5U4N7 250 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 ACOT7LQ6ZUV0 252 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 C1QTNF4Q9BXJ3 329 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 SAV1Q9H4B6 383 aaPredicted RBP10.91□□□□□ -0.66
LIG1-215ENST00000597901 GSKIPQ9P0R6 139 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 HLA-DRB4X5D2U9 266 aa10.91□□□□□ -0.66
LIG1-215ENST00000597901 ELOA3CA0A087WX78 387 aaPredicted RBP10.9□□□□□ -0.66
LIG1-215ENST00000597901 LYRM1O43325 122 aa10.9□□□□□ -0.66
LIG1-215ENST00000597901 SSSCA1O60232 199 aa10.9□□□□□ -0.66
LIG1-215ENST00000597901 PSMB3P49720 205 aa10.9□□□□□ -0.66
LIG1-215ENST00000597901 TMEM14EPQ6UXP3 125 aa10.9□□□□□ -0.66
LIG1-215ENST00000597901 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
LIG1-215ENST00000597901 C17orf77Q96MU5 243 aa10.9□□□□□ -0.66
LIG1-215ENST00000597901 RSG1Q9BU20 258 aa10.9□□□□□ -0.66
LIG1-215ENST00000597901 HRH4Q9H3N8 390 aa10.9□□□□□ -0.66
LIG1-215ENST00000597901 AGRNO00468 2067 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 ALMS1Q8TCU4 4167 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 SMCO3A2RU48 225 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 ISLRO14498 428 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 CCNKO75909 580 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 SCGB1D2O95969 90 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 TCRBP04435 133 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 IL5P05113 134 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 METTL15P1P0C7V9 234 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 GALR1P47211 349 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 FOXI2Q6ZQN5 318 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 CYP2G1PQ6ZSU1 146 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 OR1B1Q8NGR6 318 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 C2CD4CQ8TF44 421 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 TMEM147Q9BVK8 224 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 C20orf85Q9H1P6 137 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 SLC25A32Q9H2D1 315 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 SLC25A22Q9H936 323 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 NPVFQ9HCQ7 196 aa10.89□□□□□ -0.67
LIG1-215ENST00000597901 HLA-DMBP28068 263 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 S100A7P31151 101 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 FXYD7P58549 80 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 TAS2R30P59541 319 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 SPATA31B1PQ5VZV4 182 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 OR10P1Q8NGE3 313 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 OR4B1Q8NGF8 309 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 C16orf92Q96LL3 132 aa10.88□□□□□ -0.67
LIG1-215ENST00000597901 TRAV6A0A075B6T7 132 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 C11orf94C9JXX5 98 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 F6UB75 175 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 TSC22D2O75157 780 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 HYPMO75409 117 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
LIG1-215ENST00000597901 MEOX2P50222 304 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
LIG1-215ENST00000597901 DLK1P80370 383 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 SAMD13Q5VXD3 122 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 LGALS9CQ6DKI2 356 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 EBLN2Q6P2I7 272 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 C20orf173Q96LM9 149 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 GPR82Q96P67 336 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 DOK5Q9P104 306 aa10.87□□□□□ -0.67
LIG1-215ENST00000597901 A0A0J9YX75 114 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 C7orf66A4D0T2 115 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 FNDC10F2Z333 226 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 PLP1P60201 277 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 RAP2BP61225 183 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 SELENOTP62341 195 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 PSG9Q00887 426 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 ARL16Q0P5N6 197 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 FAM78BQ5VT40 261 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 ZNF705AQ6ZN79 300 aaPredicted RBP10.86□□□□□ -0.67
LIG1-215ENST00000597901 ZNF431Q8TF32 576 aaPredicted RBP10.86□□□□□ -0.67
LIG1-215ENST00000597901 SHANK2-AS3Q9BTD1 123 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 CCDC32Q9BV29 185 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 SCRT1Q9BWW7 348 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 SLC25A39Q9BZJ4 359 aaPredicted RBP10.86□□□□□ -0.67
LIG1-215ENST00000597901 RPRMQ9NS64 109 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 HIGD1AQ9Y241 93 aa10.86□□□□□ -0.67
LIG1-215ENST00000597901 RCL1Q9Y2P8 373 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms