RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 HBG1P69891 147 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 HBG2P69892 147 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 LAMTOR1Q6IAA8 161 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 C11orf45Q8TAV5 145 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 CHAC2Q8WUX2 184 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 NPIPB3Q92617 1050 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 RARRES2Q99969 163 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 CHRDL1Q9BU40 450 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 RNF126Q9BV68 326 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 CSTL1Q9H114 145 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 IGSF23A1L1A6 192 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 F8W735 103 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 CCNKO75909 580 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 DLK1P80370 383 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 RELQ04864 619 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 GAMTQ14353 236 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 ACOT7LQ6ZUV0 252 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 LILRB2Q8N423 598 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-215ENST00000597649 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 OR4C46A6NHA9 309 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 PMS2P5A8MQ11 134 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 PRSS46E5RG02 174 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 DEFB4AO15263 64 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 CTSGP08311 255 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 OR10J1P30954 320 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 S100A11P31949 105 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 ADMP35318 185 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 SLC38A11Q08AI6 406 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 OR1S2Q8NGQ3 325 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 OR11H2Q8NH07 326 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 GGACTQ9BVM4 153 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 APLNQ9ULZ1 77 aa12.03□□□□□ -0.48
SHKBP1-215ENST00000597649 FXYD6-FXYD2A0A087WZ82 144 aa12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 NDUFA4O00483 81 aa12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 YIF1AO95070 293 aa12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 FABP1P07148 127 aa12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 RPL12P30050 165 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 BAXQ07812 192 aa12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 C2CD4CQ8TF44 421 aa12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 RNF2Q99496 336 aa12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 C11orf68Q9H3H3 251 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-215ENST00000597649 K7EMT4 169 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 NHLH2Q02577 135 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 ARL16Q0P5N6 197 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 ATP6V1FQ16864 119 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 TIGITQ495A1 244 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 Q5BKY6 102 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 ZNF600Q6ZNG1 722 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 INO80EQ8NBZ0 244 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 MFFQ9GZY8 342 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 NPVFQ9HCQ7 196 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
SHKBP1-215ENST00000597649 A0A1B0GVG6 124 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 FNDC10F2Z333 226 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 IGLC1P0CG04 106 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 TFPI2P48307 235 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 ZNF546Q86UE3 836 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 Q8WTZ3 238 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 TMEM147Q9BVK8 224 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 UQCC1Q9NVA1 299 aa12□□□□□ -0.49
SHKBP1-215ENST00000597649 IGHV3-49A0A0A0MS15 119 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 A0A1B0GVY2 172 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 IGLL5B9A064 214 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 SMLR1H3BR10 107 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 CHEK1O14757 476 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 YPEL3P61236 119 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 AKAP14Q86UN6 197 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 OR5C1Q8NGR4 320 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 RHPN1-AS1Q9BWJ2 59 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 HSPB11Q9Y547 144 aa11.99□□□□□ -0.49
SHKBP1-215ENST00000597649 IGKV3-7A0A075B6H7 116 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 IGKV1-17P01599 117 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 RD3LP0DJH9 198 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 TCTAP57738 103 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 RAB31Q13636 194 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 CLINT1Q14677 625 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 FAM90A2PQ658T7 463 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 TEPPQ6URK8 271 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 THAP8Q8NA92 274 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 TRGV9Q99603 122 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 PUS1Q9Y606 427 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 MUC4Q99102 2169 aa11.98□□□□□ -0.49
SHKBP1-215ENST00000597649 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 DFFBO76075 338 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 TOMM40O96008 361 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 TOMM20LQ6UXN7 152 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 ST6GAL2Q96JF0 529 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 GINS3Q9BRX5 216 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 SMIM3Q9BZL3 60 aa11.97□□□□□ -0.49
SHKBP1-215ENST00000597649 HSPG2P98160 4391 aa11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 ARPC5O15511 151 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms