RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 NPVFQ9HCQ7 196 aa8.76□□□□□ -1.01
H3F3B-212ENST00000592643 RETNQ9HD89 108 aa8.76□□□□□ -1.01
H3F3B-212ENST00000592643 SLC45A2Q9UMX9 530 aa8.76□□□□□ -1.01
H3F3B-212ENST00000592643 TRAV2A0A0B4J234 112 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 SOCS3O14543 225 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 AGPAT2O15120 278 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 MPC2O95563 127 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 PLP1P60201 277 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 Q5BKY6 102 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 LEMD1Q68G75 181 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 TUBA4BQ9H853 241 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 WDR83OSQ9Y284 106 aa8.75□□□□□ -1.01
H3F3B-212ENST00000592643 CSMD3Q7Z407 3707 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 CD5P06127 495 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 LYL1P12980 280 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 ORM2P19652 201 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 PRR20EP86478 221 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 PRR20CP86479 221 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 PRR20DP86480 221 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 PRR20BP86481 221 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 PRR20AP86496 221 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 EWSR1Q01844 656 aaKnown RBP eCLIP8.74□□□□□ -1.01
H3F3B-212ENST00000592643 RGS21Q2M5E4 152 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 MORN5Q5VZ52 161 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 TEPPQ6URK8 271 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 BPIFCQ8NFQ6 507 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 STXBP6Q8NFX7 210 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 UHRF2Q96PU4 802 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 SCRT1Q9BWW7 348 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 GGTLC1Q9BX51 225 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 SLC25A32Q9H2D1 315 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 TMEM231Q9H6L2 316 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 DOK5Q9P104 306 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 U3KQK5 164 aa8.74□□□□□ -1.01
H3F3B-212ENST00000592643 ZNF98A6NK75 572 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 E5RGE8 158 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 G3V3Q6 166 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 H3BRN7 92 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 FABP1P07148 127 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 PVALBP20472 110 aaPredicted RBP8.73□□□□□ -1.01
H3F3B-212ENST00000592643 BMI1P35226 326 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 DEFB131AP59861 70 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 DEFB1P60022 68 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 RPL11P62913 178 aaKnown RBP8.73□□□□□ -1.01
H3F3B-212ENST00000592643 CYCSP99999 105 aaKnown RBP8.73□□□□□ -1.01
H3F3B-212ENST00000592643 C1orf194Q5T5A4 169 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 SIGLEC15Q6ZMC9 328 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 OR1B1Q8NGR6 318 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 TMEM37Q8WXS4 190 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 UQCC1Q9NVA1 299 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 MBD2Q9UBB5 411 aa8.73□□□□□ -1.01
H3F3B-212ENST00000592643 HELTA6NFD8 242 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 MRPS12O15235 138 aaKnown RBP8.72□□□□□ -1.01
H3F3B-212ENST00000592643 CFDP00746 253 aaPredicted RBP8.72□□□□□ -1.01
H3F3B-212ENST00000592643 GIG44P09565 113 aaPredicted RBP8.72□□□□□ -1.01
H3F3B-212ENST00000592643 ZNF688P0C7X2 276 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 S100A11P31949 105 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 SELENOTP62341 195 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 MIC13Q5XKP0 118 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 OR5C1Q8NGR4 320 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 CHAC2Q8WUX2 184 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 GRAMD2BQ96HH9 432 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 RCHY1Q96PM5 261 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 SHANK2-AS3Q9BTD1 123 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 TMEM147Q9BVK8 224 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 SLC25A39Q9BZJ4 359 aaPredicted RBP8.72□□□□□ -1.01
H3F3B-212ENST00000592643 WFDC1Q9HC57 220 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 NRN1Q9NPD7 142 aa8.72□□□□□ -1.01
H3F3B-212ENST00000592643 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
H3F3B-212ENST00000592643 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
H3F3B-212ENST00000592643 UBE2L5PA0A1B0GUS4 154 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 DNASE2O00115 360 aaPredicted RBP8.71□□□□□ -1.02
H3F3B-212ENST00000592643 HYPMO75409 117 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 RPL35AP18077 110 aaKnown RBP8.71□□□□□ -1.02
H3F3B-212ENST00000592643 CAMLGP49069 296 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 PAFAH1B2P68402 229 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 STX12Q86Y82 276 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 THAP6Q8TBB0 222 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 NARS2Q96I59 477 aaKnown RBP8.71□□□□□ -1.02
H3F3B-212ENST00000592643 C20orf173Q96LM9 149 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 ARL6Q9H0F7 186 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 MED28Q9H204 178 aa8.71□□□□□ -1.02
H3F3B-212ENST00000592643 TRAV8-2A0A0B4J237 113 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 KNCNA6PVL3 124 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 CLINT1Q14677 625 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 OPCMLQ14982 345 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 GCSAMLQ5JQS6 135 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 ZNF546Q86UE3 836 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 OVOL2Q9BRP0 275 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 ARV1Q9H2C2 271 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 SLC25A22Q9H936 323 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 EDA2RQ9HAV5 297 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 HSPB11Q9Y547 144 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 RFNGQ9Y644 331 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 STARD9Q9P2P6 4700 aa8.7□□□□□ -1.02
H3F3B-212ENST00000592643 RLN2P04090 185 aa8.69□□□□□ -1.02
H3F3B-212ENST00000592643 RPL29P47914 159 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms