RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 S100A7P31151 101 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 NKX2-1P43699 371 aaPredicted RBP5.53□□□□□ -1.52
NPC1-208ENST00000590301 NANOS2P60321 138 aaKnown RBP5.53□□□□□ -1.52
NPC1-208ENST00000590301 VAMP2P63027 116 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 RAB32Q13637 225 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 ACTL10Q5JWF8 245 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 SPATA31B1PQ5VZV4 182 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 TMED4Q7Z7H5 227 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 C2CD4CQ8TF44 421 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 SDHCQ99643 169 aaPredicted RBP5.53□□□□□ -1.52
NPC1-208ENST00000590301 TBC1D24Q9ULP9 559 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 SLC45A2Q9UMX9 530 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 BIRC6Q9NR09 4857 aa5.53□□□□□ -1.52
NPC1-208ENST00000590301 IGHV4-28A0A0C4DH34 117 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 KNCNA6PVL3 124 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 SNRPGP15A8MWD9 76 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 H3BMM0 161 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 NXPH3O95157 252 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 HLA-DRB4P13762 266 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 C4BPBP20851 252 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 ID1P41134 155 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 PSMB3P49720 205 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 MEOX2P50222 304 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 GAMTQ14353 236 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 SPANXN2Q5MJ10 180 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 GGNBP1Q5YKI7 109 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 CSNK1G2-AS1Q8NCQ2 148 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 TRGV9Q99603 122 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 PBDC1Q9BVG4 233 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 HLA-DRB4X5D2U9 266 aa5.52□□□□□ -1.53
NPC1-208ENST00000590301 IGKV1D-37A0A075B6S9 117 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 TRAV10A0A0B4J240 114 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 TMEM189A5PLL7 270 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 NAP1L6A6NFF2 107 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 CCDC160A6NGH7 325 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 ISLRO14498 428 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 SYNGR2O43760 224 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 SFT2D2O95562 160 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 FOXI2Q6ZQN5 318 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 THAP8Q8NA92 274 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 RAB24Q969Q5 203 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 GPR82Q96P67 336 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 NEU1Q99519 415 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 SRRQ9GZT4 340 aa5.51□□□□□ -1.53
NPC1-208ENST00000590301 TEX48A0A1B0GUV7 120 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 DEFB4AO15263 64 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 RBMY1A1P0DJD3 496 aaKnown RBP5.5□□□□□ -1.53
NPC1-208ENST00000590301 RBMY1CP0DJD4 496 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 HLA-DMBP28068 263 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 INPP1P49441 399 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 LYZP61626 148 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 ZNF90Q03938 601 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 PPP1R1AQ13522 171 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 RBMY1FQ15415 496 aaKnown RBP5.5□□□□□ -1.53
NPC1-208ENST00000590301 S100A7AQ86SG5 101 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 OR8I2Q8N0Y5 310 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 OR4D5Q8NGN0 318 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 COQ8AQ8NI60 647 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 PPP1R14BQ96C90 147 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 RNF126Q9BV68 326 aa5.5□□□□□ -1.53
NPC1-208ENST00000590301 ZNF705FA8MVS1 300 aaPredicted RBP5.49□□□□□ -1.53
NPC1-208ENST00000590301 IGLL5B9A064 214 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 SOCS3O14543 225 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 NDUFB6O95139 128 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 TNFRSF6BO95407 300 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 IFNA21P01568 189 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 ZNF705DP0CH99 300 aaPredicted RBP5.49□□□□□ -1.53
NPC1-208ENST00000590301 ZNF705BP0CI00 300 aaPredicted RBP5.49□□□□□ -1.53
NPC1-208ENST00000590301 IAPPP10997 89 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 GALR1P47211 349 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 PAX9P55771 341 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 BAK1Q16611 211 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 CNPY1Q3B7I2 92 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 TRIQKQ629K1 86 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 EBLN2Q6P2I7 272 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 ZNF705AQ6ZN79 300 aaPredicted RBP5.49□□□□□ -1.53
NPC1-208ENST00000590301 BPIFCQ8NFQ6 507 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 OR1B1Q8NGR6 318 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 SAV1Q9H4B6 383 aaPredicted RBP5.49□□□□□ -1.53
NPC1-208ENST00000590301 RPRMQ9NS64 109 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 PAIP2BQ9ULR5 123 aaKnown RBP5.49□□□□□ -1.53
NPC1-208ENST00000590301 RNF24Q9Y225 148 aa5.49□□□□□ -1.53
NPC1-208ENST00000590301 STRAPQ9Y3F4 350 aaKnown RBP5.49□□□□□ -1.53
NPC1-208ENST00000590301 IGKV1OR2-108A0A075B7D4 117 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 C9orf170A2RU37 121 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 PGPEP1LA6NFU8 196 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 CENPXA8MT69 81 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 PRSS46E5RG02 174 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 FNDC10F2Z333 226 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 WRBO00258 174 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 AMBPP02760 352 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 HOXB5P09067 269 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 SPART-AS1P0CW21 52 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 SELENOTP62341 195 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 OR2F1Q13607 317 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 SPANXN5Q5MJ07 72 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 Q6ZTC4 211 aa5.48□□□□□ -1.53
NPC1-208ENST00000590301 TMEM144Q7Z5S9 345 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms