RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 COX7A1P24310 79 aa13.79□□□□□ -0.2
ERBB2-212ENST00000582788 PRRX1P54821 245 aa13.79□□□□□ -0.2
ERBB2-212ENST00000582788 SLAQ13239 276 aa13.79□□□□□ -0.2
ERBB2-212ENST00000582788 PDPNQ86YL7 162 aa13.79□□□□□ -0.2
ERBB2-212ENST00000582788 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
ERBB2-212ENST00000582788 COL12A1Q99715 3063 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 ARF6P62330 175 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 C10orf55Q5SWW7 151 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 C19orf35Q6ZS72 473 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 OR4C13Q8NGP0 309 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 TSKUQ8WUA8 353 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 NPIPB3Q92617 1050 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 FXYD5Q96DB9 178 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 ZNF331Q9NQX6 463 aaPredicted RBP13.78□□□□□ -0.2
ERBB2-212ENST00000582788 ARHGAP32A7KAX9 2087 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 LOC105371242A0A075B767 164 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 BUB1B-PAK6H3BSN5 160 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 IGLV2-23P01705 113 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 IGLC2P0DOY2 106 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 IGLC3P0DOY3 106 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 BPIFB3P59826 476 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 SPATA45Q537H7 98 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 ASPHD1Q5U4P2 390 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 VSTM2AQ8TAG5 236 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 ORAOV1Q8WV07 137 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 GRAMD2BQ96HH9 432 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 MRPL36Q9P0J6 103 aaKnown RBP13.78□□□□□ -0.2
ERBB2-212ENST00000582788 MRPL27Q9P0M9 148 aaKnown RBP13.78□□□□□ -0.2
ERBB2-212ENST00000582788 WASHC3Q9Y3C0 194 aa13.78□□□□□ -0.2
ERBB2-212ENST00000582788 MYCNOSP40205 109 aa13.77□□□□□ -0.21
ERBB2-212ENST00000582788 GDF5OSQ5U4N7 250 aa13.77□□□□□ -0.21
ERBB2-212ENST00000582788 DMRTA1Q5VZB9 504 aa13.77□□□□□ -0.21
ERBB2-212ENST00000582788 C18orf32Q8TCD1 76 aa13.77□□□□□ -0.21
ERBB2-212ENST00000582788 C7orf69Q9H7B7 122 aa13.77□□□□□ -0.21
ERBB2-212ENST00000582788 TRAV34A0A0B4J273 112 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 C3orf79P0CE67 100 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 BATFQ16520 125 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 NUDT10Q8NFP7 164 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 IGFBPL1Q8WX77 278 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 NUDT11Q96G61 164 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 BAHCC1Q9P281 2608 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 IGHV3-72A0A0B4J1Y9 119 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 GOSR1O95249 250 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 RITA1Q96K30 269 aa13.76□□□□□ -0.21
ERBB2-212ENST00000582788 DOPEY1Q5JWR5 2465 aa13.75□□□□□ -0.21
ERBB2-212ENST00000582788 IGHV3-48P01763 117 aa13.75□□□□□ -0.21
ERBB2-212ENST00000582788 ZFP36P26651 326 aaKnown RBP13.75□□□□□ -0.21
ERBB2-212ENST00000582788 MC5RP33032 325 aa13.75□□□□□ -0.21
ERBB2-212ENST00000582788 SUB1P53999 127 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERBB2-212ENST00000582788 MFAP2P55001 183 aa13.75□□□□□ -0.21
ERBB2-212ENST00000582788 NUP35Q8NFH5 326 aa13.75□□□□□ -0.21
ERBB2-212ENST00000582788 MRPS16Q9Y3D3 137 aaKnown RBP13.75□□□□□ -0.21
ERBB2-212ENST00000582788 TACC2O95359 2948 aa13.75□□□□□ -0.21
ERBB2-212ENST00000582788 C20orf202A1L168 122 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 M0R1W7 72 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 HYPMO75409 117 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 PMCHL1Q16048 86 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 LDLRAD2Q5SZI1 272 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 BPESC1Q9GZL8 116 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 USP9XQ93008 2570 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-212ENST00000582788 IGHV1-3A0A0C4DH29 117 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 LY6LH3BQJ8 138 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 IGHV4-39P01824 125 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 HNRNPA3P51991 378 aaKnown RBP13.74□□□□□ -0.21
ERBB2-212ENST00000582788 KLF5Q13887 457 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-212ENST00000582788 MMDQ15546 238 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 MRGPRG-AS1Q2M3A8 158 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 NAV3Q8IVL0 2385 aa13.74□□□□□ -0.21
ERBB2-212ENST00000582788 A0A1W2PPI3 338 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 ENSAO43768 121 aaKnown RBP13.73□□□□□ -0.21
ERBB2-212ENST00000582788 OR2J3O76001 311 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 GNG5P63218 68 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 SRSF1Q07955 248 aaKnown RBP eCLIP13.73□□□□□ -0.21
ERBB2-212ENST00000582788 TXN2Q99757 166 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 CHRDL1Q9BU40 450 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 TPSG1Q9NRR2 321 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 INSIG2Q9Y5U4 225 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 KLRD1Q13241 179 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 PVRIGQ6DKI7 326 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 HCP5Q6MZN7 132 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 LINC00305Q7Z4B0 112 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 OR11H6Q8NGC7 330 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 SPOCK3Q9BQ16 436 aa13.73□□□□□ -0.21
ERBB2-212ENST00000582788 CRYGCP07315 174 aa13.72□□□□□ -0.21
ERBB2-212ENST00000582788 HIST1H1EP10412 219 aaKnown RBP13.72□□□□□ -0.21
ERBB2-212ENST00000582788 NTF3P20783 257 aa13.72□□□□□ -0.21
ERBB2-212ENST00000582788 PRTN3P24158 256 aa13.72□□□□□ -0.21
ERBB2-212ENST00000582788 Q6ZN92 141 aa13.72□□□□□ -0.21
ERBB2-212ENST00000582788 RPEQ96AT9 228 aa13.72□□□□□ -0.21
ERBB2-212ENST00000582788 EPDR1Q9UM22 224 aa13.72□□□□□ -0.21
ERBB2-212ENST00000582788 KLF12Q9Y4X4 402 aa13.72□□□□□ -0.21
ERBB2-212ENST00000582788 A0A1B0GXF2 115 aa13.71□□□□□ -0.21
ERBB2-212ENST00000582788 CORTO00230 105 aa13.71□□□□□ -0.21
ERBB2-212ENST00000582788 SLC25A17O43808 307 aa13.71□□□□□ -0.21
ERBB2-212ENST00000582788 TFPI2P48307 235 aa13.71□□□□□ -0.21
ERBB2-212ENST00000582788 PCP4P48539 62 aa13.71□□□□□ -0.21
ERBB2-212ENST00000582788 VMA21Q3ZAQ7 101 aa13.71□□□□□ -0.21
ERBB2-212ENST00000582788 RUSC1-AS1Q66K80 236 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms