RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 OR11H12B2RN74 326 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 PET100P0DJ07 73 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 ORM2P19652 201 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 SELENOTP62341 195 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 HBG1P69891 147 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 HBG2P69892 147 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 BAXQ07812 192 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 ATP6V1FQ16864 119 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 LINC00322Q6ZN03 302 aaPredicted RBP12.21□□□□□ -0.45
RNF43-206ENST00000582293 C17orf77Q96MU5 243 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 DOK5Q9P104 306 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 UBQLN2Q9UHD9 624 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 HSPB11Q9Y547 144 aa12.21□□□□□ -0.45
RNF43-206ENST00000582293 OR4C46A6NHA9 309 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 K7EQG2 157 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 CD5P06127 495 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
RNF43-206ENST00000582293 PRR20EP86478 221 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 PRR20CP86479 221 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 PRR20DP86480 221 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 PRR20BP86481 221 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 PRR20AP86496 221 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 OR1B1Q8NGR6 318 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 DCANP1Q8TF63 244 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 GRAMD2BQ96HH9 432 aa12.2□□□□□ -0.46
RNF43-206ENST00000582293 NARS2Q96I59 477 aaKnown RBP12.2□□□□□ -0.46
RNF43-206ENST00000582293 COL7A1Q02388 2944 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 TRAV2A0A0B4J234 112 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
RNF43-206ENST00000582293 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
RNF43-206ENST00000582293 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
RNF43-206ENST00000582293 CAMLGP49069 296 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 CLINT1Q14677 625 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 ZNF124Q15973 351 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 MIC13Q5XKP0 118 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 ZNF546Q86UE3 836 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 WFDC3Q8IUB2 231 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 SBSPONQ8IVN8 264 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 THAP6Q8TBB0 222 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 ASB13Q8WXK3 278 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 UHRF2Q96PU4 802 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 WFDC1Q9HC57 220 aa12.19□□□□□ -0.46
RNF43-206ENST00000582293 TGP01266 2768 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 ZNF98A6NK75 572 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 H3BRN7 92 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 RAP2BP61225 183 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 RPL11P62913 178 aaKnown RBP12.18□□□□□ -0.46
RNF43-206ENST00000582293 OPCMLQ14982 345 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 C1orf194Q5T5A4 169 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 LEMD1Q68G75 181 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 SIGLEC15Q6ZMC9 328 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 STXBP6Q8NFX7 210 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 TMEM37Q8WXS4 190 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 ASCL2Q99929 193 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 FAM110AQ9BQ89 295 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 SCRT1Q9BWW7 348 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 SLC25A39Q9BZJ4 359 aaPredicted RBP12.18□□□□□ -0.46
RNF43-206ENST00000582293 ARL6Q9H0F7 186 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 SLC25A32Q9H2D1 315 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 SRD5A3Q9H8P0 318 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
RNF43-206ENST00000582293 HELTA6NFD8 242 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 HYPMO75409 117 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 FGF7P21781 194 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
RNF43-206ENST00000582293 MORN5Q5VZ52 161 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 Q6ZNX1 250 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 APRG1Q8IVJ8 170 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 SHANK2-AS3Q9BTD1 123 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 NPCDR1Q9BY65 106 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 SMIM3Q9BZL3 60 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 ARV1Q9H2C2 271 aa12.17□□□□□ -0.46
RNF43-206ENST00000582293 SOCS3O14543 225 aa12.16□□□□□ -0.46
RNF43-206ENST00000582293 RPL29P47914 159 aaKnown RBP12.16□□□□□ -0.46
RNF43-206ENST00000582293 PAFAH1B2P68402 229 aa12.16□□□□□ -0.46
RNF43-206ENST00000582293 OR2T35Q8NGX2 323 aa12.16□□□□□ -0.46
RNF43-206ENST00000582293 ATP5SQ99766 215 aa12.16□□□□□ -0.46
RNF43-206ENST00000582293 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
RNF43-206ENST00000582293 NRN1Q9NPD7 142 aa12.16□□□□□ -0.46
RNF43-206ENST00000582293 HIGD1AQ9Y241 93 aa12.16□□□□□ -0.46
RNF43-206ENST00000582293 RNF222A6NCQ9 220 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 SMLR1H3BR10 107 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 DNASE2O00115 360 aaPredicted RBP12.15□□□□□ -0.46
RNF43-206ENST00000582293 MRPS12O15235 138 aaKnown RBP12.15□□□□□ -0.46
RNF43-206ENST00000582293 MPDU1O75352 247 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 OR5G3P0C626 314 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 AP2S1P53680 142 aaPredicted RBP12.15□□□□□ -0.46
RNF43-206ENST00000582293 FGL1Q08830 312 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 PXDC1Q5TGL8 231 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 PPP1R14BQ96C90 147 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 AQP10Q96PS8 301 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 TUBA4BQ9H853 241 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 SLC25A22Q9H936 323 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 SLC39A9Q9NUM3 307 aa12.15□□□□□ -0.46
RNF43-206ENST00000582293 DEFB131AP59861 70 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 B2MP61769 119 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 RAB31Q13636 194 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 HAGHQ16775 308 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 GCSAMLQ5JQS6 135 aa12.14□□□□□ -0.47
RNF43-206ENST00000582293 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms