RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 THYN1Q9P016 225 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 MRPL27Q9P0M9 148 aaKnown RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZNF580Q9UK33 172 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.657e-42■■■□□ 15.9
RNU4ATAC-201ENST00000580972 SONP18583 2426 aaKnown RBP4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ITPR2Q14571 2701 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 OTOGQ6ZRI0 2925 aa4.73□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TET2Q6N021 2002 aaPredicted RBP4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 IGHV4OR15-8A0A075B7B6 117 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 A0A087WW49 117 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TRBV7-1A0A0A6YYK4 115 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SCO2A0A1W2PP80 73 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TMEM218A2RU14 115 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 GGTLC3B5MD39 225 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 H3BQ15 152 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 H3BUA1 57 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CLDN34H7C241 214 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 MRPS12O15235 138 aaKnown RBP4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CRLF1O75462 422 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TSPAN9O75954 239 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 GP9P14770 177 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FOSL1P15407 271 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CD81P60033 236 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 GNG5P63218 68 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 UBE2L3P68036 154 aaKnown RBP4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FOXE3Q13461 319 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 GUCA2BQ16661 112 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 KHDC1LQ5JSQ8 128 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZNF343Q6P1L6 599 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 ZNF600Q6ZNG1 722 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 EIF4E3Q8N5X7 224 aaKnown RBP4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 CYB561D1Q8N8Q1 229 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 LINC01006Q8NI28 216 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 WIPF2Q8TF74 440 aaPredicted RBP4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 Q8WTZ3 238 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 BLNKQ8WV28 456 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FXYD5Q96DB9 178 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TXN2Q99757 166 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 PAXXQ9BUH6 204 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 C20orf24Q9BUV8 137 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 SMAD5-AS1Q9Y6J3 95 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 FLNAP21333 2647 aaKnown RBP4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 MYO9AB2RTY4 2548 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 PLXNB1O43157 2135 aa4.72□□□□□ -1.65
RNU4ATAC-201ENST00000580972 TRAV30A0A087WSZ9 112 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ZNF98A6NK75 572 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 FAM74A7A6NL05 159 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 HAX1O00165 279 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 SLC17A3O00476 420 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 BRI3O95415 125 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 CXorf1O96002 111 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ELANEP08246 267 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 LGALS1P09382 135 aaKnown RBP4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ZP3P21754 424 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 HLA-DMBP28068 263 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 SLURP1P55000 103 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 TM4SF20Q53R12 229 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 KHDC3LQ587J8 217 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 IGFL4Q6B9Z1 124 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 TEX38Q6PEX7 206 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 COMMD1Q8N668 190 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 RNF152Q8N8N0 203 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 OR4F5Q8NH21 305 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 USMG5Q96IX5 58 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 OR4F4Q96R69 305 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ASCL2Q99929 193 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 DERL1Q9BUN8 251 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 MRPL32Q9BYC8 188 aaKnown RBP4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 OR51M1Q9H341 326 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ZNF586Q9NXT0 402 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 NAV3Q8IVL0 2385 aa4.71□□□□□ -1.66
RNU4ATAC-201ENST00000580972 FN1P02751 2386 aaKnown RBP4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ELOA3CA0A087WX78 387 aaPredicted RBP4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ZNF320A2RRD8 509 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 NUDT19A8MXV4 375 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 C11orf94C9JXX5 98 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 NDUFB4O95168 129 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 CRYBA1P05813 215 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 FABP1P07148 127 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 AKR1C3P42330 323 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 SLC35B1P78383 322 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 PEA15Q15121 130 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ZNF674Q2M3X9 581 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 FAM90A2PQ658T7 463 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 UQCC3Q6UW78 93 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 C8orf86Q6ZUL3 223 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 EXOC3-AS1Q8N2X6 119 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 TMEM190Q8WZ59 177 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 RPUSD4Q96CM3 377 aaKnown RBP4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 PFDN5Q99471 154 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 RNF2Q99496 336 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 CITED2Q99967 270 aaPredicted RBP4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 ELOVL1Q9BW60 279 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 C16orf95Q9H693 158 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 PEF1Q9UBV8 284 aaKnown RBP4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 RABAC1Q9UI14 185 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 VAX2Q9UIW0 290 aa4.7□□□□□ -1.66
RNU4ATAC-201ENST00000580972 RPH3ALQ9UNE2 315 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms