RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 OR2T8A6NH00 312 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 B4DEV8 164 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 FCGR2BP31994 310 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RPS10P46783 165 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PRR20EP86478 221 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PRR20CP86479 221 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PRR20DP86480 221 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PRR20BP86481 221 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PRR20AP86496 221 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ICAM4Q14773 271 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TIGITQ495A1 244 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PYY3Q5JQD4 70 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TVP23CQ96ET8 276 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 VSIRQ9H7M9 311 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 GAR1Q9NY12 217 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 DOK5Q9P104 306 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CUBNO60494 3623 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ELOA3CA0A087WX78 387 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 A0A0G2JLM5 398 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TGOLN2O43493 480 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HBE1P02100 147 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ELANEP08246 267 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 LINC00869P0C866 280 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 S100A2P29034 98 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TAGLN2P37802 199 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 SELENOTP62341 195 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 FOXE3Q13461 319 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TMEM41BQ5BJD5 291 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CLEC19AQ6UXS0 136 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CCDC140Q96MF4 163 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 C16orf95Q9H693 158 aa10.75□□□□□ -0.69
CDK5RAP3-219ENST00000580670 MAST4O15021 2626 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 SCGB2A1O75556 95 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 YIF1AO95070 293 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 MBP02144 154 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CLEC3BP05452 202 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 GPR183P32249 361 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 SRSF2Q01130 221 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HAGHQ16775 308 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ACOT6Q3I5F7 207 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 KHDC3LQ587J8 217 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 KLHDC1Q8N7A1 406 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 Q8WTZ3 238 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RPRMQ9NS64 109 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TMEM242Q9NWH2 141 aa10.74□□□□□ -0.69
CDK5RAP3-219ENST00000580670 NDUFA7O95182 113 aa10.73□□□□□ -0.69
CDK5RAP3-219ENST00000580670 IGHV3-11P01762 117 aa10.73□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CXCL1P09341 107 aa10.73□□□□□ -0.69
CDK5RAP3-219ENST00000580670 NDUFA6P56556 154 aa10.73□□□□□ -0.69
CDK5RAP3-219ENST00000580670 GCSAMLQ5JQS6 135 aa10.73□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ZNF727A8MUV8 499 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CTSGP08311 255 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RD3LP0DJH9 198 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 OR5AU1Q8NGC0 362 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 LINC01006Q8NI28 216 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 CHRDL1Q9BU40 450 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BKO60814 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TOMM40O96008 361 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BJP06899 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PSG1P11464 419 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BOP23527 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BBP33778 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ADMP35318 185 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BDP58876 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BCP62807 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST2H2BEQ16778 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ZNF674Q2M3X9 581 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RNF152Q8N8N0 203 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BHQ93079 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RCC1LQ96I51 464 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BNQ99877 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST1H2BMQ99879 126 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 NIPSNAP3BQ9BS92 247 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 GNB4Q9HAV0 340 aa10.72□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 SSTP61278 116 aa10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ZNF343Q6P1L6 599 aa10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 HIST3H2BBQ8N257 126 aa10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 RPP25LQ8N5L8 163 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 ZNF491Q8N8L2 437 aa10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 OR4X2Q8NGF9 303 aa10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 OR4F5Q8NH21 305 aa10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 PFDN5Q99471 154 aa10.71□□□□□ -0.69
CDK5RAP3-219ENST00000580670 TEP1Q99973 2627 aaKnown RBP10.71□□□□□ -0.7
CDK5RAP3-219ENST00000580670 LOC102723971A0A1B0GUV8 181 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PPP5D1E7EU14 171 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 LYZP61626 148 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PNRC1Q12796 327 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 CYB561D1Q8N8Q1 229 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 OR51G1Q8NGK1 321 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 OR5B12Q96R08 314 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 ACTR3CQ9C0K3 210 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms