RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SLC25A39Q9BZJ4 359 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ANK3Q12955 4377 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-218ENST00000580391 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 CTSGP08311 255 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 GP9P14770 177 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 KRTAP1-1Q07627 177 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TXN2Q99757 166 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SDF2L1Q9HCN8 221 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 VPREB3Q9UKI3 123 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 NDUFB4O95168 129 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 OR2C1O95371 312 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 PPIFP30405 207 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SMUG1Q53HV7 270 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 ZNF414Q96IQ9 312 aa11.54□□□□□ -0.56
CDK5RAP3-218ENST00000580391 MYO9AB2RTY4 2548 aa11.53□□□□□ -0.56
CDK5RAP3-218ENST00000580391 IGHV3-35A0A0C4DH35 117 aa11.53□□□□□ -0.56
CDK5RAP3-218ENST00000580391 H3BRN7 92 aa11.53□□□□□ -0.56
CDK5RAP3-218ENST00000580391 AP4M1O00189 453 aa11.53□□□□□ -0.56
CDK5RAP3-218ENST00000580391 HOXA3O43365 443 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-218ENST00000580391 NAT8Q9UHE5 227 aa11.53□□□□□ -0.56
CDK5RAP3-218ENST00000580391 A0A1W2PRE2 83 aa11.52□□□□□ -0.56
CDK5RAP3-218ENST00000580391 TRGV3P03979 118 aa11.52□□□□□ -0.56
CDK5RAP3-218ENST00000580391 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.56
CDK5RAP3-218ENST00000580391 Q8WTZ3 238 aa11.52□□□□□ -0.56
CDK5RAP3-218ENST00000580391 EEF1AKMT3Q96AZ1 226 aa11.52□□□□□ -0.56
CDK5RAP3-218ENST00000580391 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 CLEC3BP05452 202 aa11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TPPP2P59282 170 aa11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 PNRC1Q12796 327 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ADIRFQ15847 76 aa11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 C11orf52Q96A22 123 aa11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 SHANK2-AS3Q9BTD1 123 aa11.52□□□□□ -0.57
CDK5RAP3-218ENST00000580391 FAM223BA6NKX1 122 aa11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 H3BTX0 84 aa11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ATP5G2Q06055 141 aa11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 FAM223AQ8IWN6 122 aa11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 BLNKQ8WV28 456 aa11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 PRDM13Q9H4Q3 707 aa11.51□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 IGHV3OR16-8A0A075B7F1 116 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TSPAN4O14817 238 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 RPL23P62829 140 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 CFHR3Q02985 330 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZNF343Q6P1L6 599 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZNF600Q6ZNG1 722 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ELOVL1Q9BW60 279 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 GNB4Q9HAV0 340 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 SMCO4Q9NRQ5 59 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 PGPEP1LA6NFU8 196 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TGOLN2O43493 480 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 PF4V1P10720 104 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 CRYBB3P26998 211 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 KLK15Q9H2R5 256 aa11.5□□□□□ -0.57
CDK5RAP3-218ENST00000580391 PPP5D1E7EU14 171 aa11.49□□□□□ -0.57
CDK5RAP3-218ENST00000580391 H3BUA1 57 aa11.49□□□□□ -0.57
CDK5RAP3-218ENST00000580391 NBEAP1P0C6P0 100 aa11.49□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZFAND3Q9H8U3 227 aa11.49□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZNF98A6NK75 572 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TOMM20LQ6UXN7 152 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZNF329Q86UD4 541 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 AURKAIP1Q9NWT8 199 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 GAR1Q9NY12 217 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TMEM14CQ9P0S9 112 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 A0A087WWC5 75 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 CD5LO43866 347 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 BRI3O95415 125 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 RANP62826 216 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 C2CD4CQ8TF44 421 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZNF586Q9NXT0 402 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
CDK5RAP3-218ENST00000580391 B4DEV8 164 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 TRBV12-3P01733 135 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 MYCNOSP40205 109 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 RPL35P42766 123 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 RNF212Q495C1 297 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 C10orf99Q6UWK7 81 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 BPIFA4PQ86YQ2 179 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 ZNF702PQ9H963 129 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 GNG5P63218 68 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
CDK5RAP3-218ENST00000580391 BMPR1BO00238 502 aa11.46□□□□□ -0.58
CDK5RAP3-218ENST00000580391 IGLC2P0DOY2 106 aa11.46□□□□□ -0.58
CDK5RAP3-218ENST00000580391 HIST1H1EP10412 219 aaKnown RBP11.46□□□□□ -0.58
CDK5RAP3-218ENST00000580391 HNF1AP20823 631 aa11.46□□□□□ -0.58
CDK5RAP3-218ENST00000580391 TEX29Q8N6K0 151 aa11.46□□□□□ -0.58
CDK5RAP3-218ENST00000580391 NPFFR1Q9GZQ6 430 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms