RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TRAV12-2A0A075B6T6 113 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 TRAV26-1A0A087WT03 109 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 LINC00315P59091 139 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 ZNF90Q03938 601 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 OR2F1Q13607 317 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 KLF9Q13886 244 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-208ENST00000573716 OR11H7Q8NGC8 314 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 TMEM170AQ8WVE7 144 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 ZNF486Q96H40 463 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-208ENST00000573716 LINC01587Q99440 93 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 CACNG5Q9UF02 275 aa8.44□□□□□ -1.06
PRPF8-208ENST00000573716 A0A1W2PPQ1 181 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 PLAC8L1A1L4L8 177 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 IFNA5P01569 189 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 ZNF182P17025 639 aaPredicted RBP8.43□□□□□ -1.06
PRPF8-208ENST00000573716 TSPOP30536 169 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 TGFBR1P36897 503 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 CNN1P51911 297 aaKnown RBP8.43□□□□□ -1.06
PRPF8-208ENST00000573716 ERVFC1-1P60608 527 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 B2MP61769 119 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 ESRGQ1W209 222 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 C1orf194Q5T5A4 169 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 NOXA1Q86UR1 476 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 CCDC71LQ8N9Z2 235 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 OR52E5Q8NH55 327 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 RSG1Q9BU20 258 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 SLC25A39Q9BZJ4 359 aaPredicted RBP8.43□□□□□ -1.06
PRPF8-208ENST00000573716 VCX3BQ9H321 246 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 SLC25A22Q9H936 323 aa8.43□□□□□ -1.06
PRPF8-208ENST00000573716 SMIM31A0A1B0GVY4 71 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 CRXO43186 299 aaPredicted RBP8.42□□□□□ -1.06
PRPF8-208ENST00000573716 DUSP14O95147 198 aaKnown RBP8.42□□□□□ -1.06
PRPF8-208ENST00000573716 UCP1P25874 307 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 GALR1P47211 349 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 MEOX2P50222 304 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 HAMPP81172 84 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 MEF2DQ14814 521 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 RNASE10Q5GAN6 216 aaKnown RBP8.42□□□□□ -1.06
PRPF8-208ENST00000573716 SAMD13Q5VXD3 122 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 GPR141Q7Z602 305 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 CROCCP3Q8IVE0 287 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 NOP10Q9NPE3 64 aaKnown RBP8.42□□□□□ -1.06
PRPF8-208ENST00000573716 PPP1R14DQ9NXH3 145 aa8.42□□□□□ -1.06
PRPF8-208ENST00000573716 TIMM8BQ9Y5J9 83 aaPredicted RBP8.42□□□□□ -1.06
PRPF8-208ENST00000573716 A8MTW9 85 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 TMEM127O75204 238 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 FABP1P07148 127 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 M6PRP20645 277 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 RHOBP62745 196 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
PRPF8-208ENST00000573716 FAM219AQ8IW50 185 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 ARRDC1Q8N5I2 433 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 RNF182Q8N6D2 247 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 OR10J6PQ8NGY7 276 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 ZFAND1Q8TCF1 268 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 RXFP4Q8TDU9 374 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 C17orf77Q96MU5 243 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 UPK3BQ9BT76 320 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 MRPS16Q9Y3D3 137 aaKnown RBP8.41□□□□□ -1.06
PRPF8-208ENST00000573716 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
PRPF8-208ENST00000573716 SNRPGP15A8MWD9 76 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 BOLA2-SMG1P6H3BVE0 249 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 GABARAPH6UMI1 98 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 ZNF701M0R085 212 aaPredicted RBP8.4□□□□□ -1.06
PRPF8-208ENST00000573716 GABARAPO95166 117 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 TNFAIP8O95379 198 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 OR5AC1P0C628 307 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 RPS19P39019 145 aaKnown RBP8.4□□□□□ -1.06
PRPF8-208ENST00000573716 LSM3P62310 102 aaKnown RBP8.4□□□□□ -1.06
PRPF8-208ENST00000573716 FGL1Q08830 312 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 ICAM4Q14773 271 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 NEDD8Q15843 81 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 SCGB2B2Q4G0G5 96 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 AARDQ4LEZ3 155 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 NMSQ5H8A3 153 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 TMEM144Q7Z5S9 345 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 ZNF738Q8NE65 137 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 OR13C8Q8NGS7 320 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 LHFPL5Q8TAF8 219 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 C16orf74Q96GX8 76 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 SLC25A32Q9H2D1 315 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 COMMD3Q9UBI1 195 aa8.4□□□□□ -1.06
PRPF8-208ENST00000573716 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 TEX13DA0A0J9YY54 714 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-208ENST00000573716 CD3DP04234 171 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 PRB4P10163 310 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-208ENST00000573716 TAS2R60P59551 318 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 HIST1H1AQ02539 215 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-208ENST00000573716 GAMTQ14353 236 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 TMEM268Q5VZI3 342 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-208ENST00000573716 Q6ZSN1 163 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 LHFPL1Q86WI0 220 aa8.39□□□□□ -1.07
PRPF8-208ENST00000573716 SELENOHQ8IZQ5 122 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms