RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 FGF16O43320 207 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 MPC2O95563 127 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 NMBP08949 121 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 CTXN2P0C2S0 81 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 PVALBP20472 110 aaPredicted RBP2.4□□□□□ -2.02
LINC00560-201ENST00000564593 RAB5CP51148 216 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 DSCR4P56555 118 aaPredicted RBP2.4□□□□□ -2.02
LINC00560-201ENST00000564593 RAB2AP61019 212 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 FOXF1Q12946 379 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 OR8B8Q15620 311 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 PLPPR5Q32ZL2 321 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 Q5BKY6 102 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 ALKAL2Q6UX46 152 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 DRAM2Q6UX65 266 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 BAP18Q8IXM2 172 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 ZNF283Q8N7M2 679 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 ACBD4Q8NC06 268 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 OR8G5Q8NG78 346 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 FNDC9Q8TBE3 224 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 ABHD14BQ96IU4 210 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 TCEAL7Q9BRU2 100 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 PBDC1Q9BVG4 233 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 CHST5Q9GZS9 411 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 PBOV1Q9GZY1 135 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 SMDT1Q9H4I9 107 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 METTL8Q9H825 291 aaKnown RBP2.4□□□□□ -2.02
LINC00560-201ENST00000564593 FAM206AQ9NX38 181 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 RASL12Q9NYN1 266 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 DKKL1Q9UK85 242 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 TNFSF18Q9UNG2 199 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 PRELID1Q9Y255 219 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 TBL2Q9Y4P3 447 aaKnown RBP2.4□□□□□ -2.02
LINC00560-201ENST00000564593 ZNF706Q9Y5V0 76 aaPredicted RBP2.4□□□□□ -2.02
LINC00560-201ENST00000564593 ASXL3Q9C0F0 2248 aa2.4□□□□□ -2.02
LINC00560-201ENST00000564593 NCOA6Q14686 2063 aaPredicted RBP2.4□□□□□ -2.02
LINC00560-201ENST00000564593 ALPK2Q86TB3 2170 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 CHD9Q3L8U1 2897 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 TRBV6-7A0A0A0MS04 114 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 DUXBA0A1W2PPF3 345 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 OR6C6A6NF89 314 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 RBFOX3A6NFN3 312 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM14DPA8MWL7 114 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 SFT2D2O95562 160 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 APOC3P02656 99 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ORM1P02763 201 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 TTRP02766 147 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 CRHP06850 196 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 AKR1C4P17516 323 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 CXCL2P19875 107 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 CSRP1P21291 193 aaKnown RBP2.4□□□□□ -2.03
LINC00560-201ENST00000564593 H2BFSP57053 126 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 FMODQ06828 376 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM249Q2WGJ8 235 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 C10orf128Q5T292 105 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ELP2Q6IA86 826 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 GLIPR1L1Q6UWM5 242 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 Q6ZS52 159 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 TMEM144Q7Z5S9 345 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ANGPTL5Q86XS5 388 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 SLC30A7Q8NEW0 376 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 OR8A1Q8NGG7 326 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 OR51A4Q8NGJ6 313 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 PPP1R1CQ8WVI7 109 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 C11orf40Q8WZ69 217 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 C2orf50Q96LR7 162 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 YPEL4Q96NS1 127 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 AQP10Q96PS8 301 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 SUCNR1Q9BXA5 334 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ULBP3Q9BZM4 244 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 METTL9Q9H1A3 318 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ZNF286AQ9HBT8 521 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ASCL3Q9NQ33 180 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 GPR84Q9NQS5 396 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ZNF492Q9P255 531 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 ANAPC10Q9UM13 185 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 BOKQ9UMX3 212 aaPredicted RBP2.4□□□□□ -2.03
LINC00560-201ENST00000564593 MTCH2Q9Y6C9 303 aa2.4□□□□□ -2.03
LINC00560-201ENST00000564593 CHD7Q9P2D1 2997 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 IGKV2-24A0A0C4DH68 120 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 IGLL5B9A064 214 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 UMAD1C9J7I0 102 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 J3QLI3 93 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 K7EPK0 472 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 M0R135 149 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 OR2J2O76002 312 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 ATG12O94817 140 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 CSN2P05814 226 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 CTSDP07339 412 aaPredicted RBP2.39□□□□□ -2.03
LINC00560-201ENST00000564593 CST2P09228 141 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 INAFM2P0DMQ5 153 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 COX5BP10606 129 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 BLVRBP30043 206 aaPredicted RBP2.39□□□□□ -2.03
LINC00560-201ENST00000564593 DEFA5Q01523 94 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 PPP1R1AQ13522 171 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 PEA15Q15121 130 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 OR8G1Q15617 311 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 KISS1Q15726 138 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 HIST3H3Q16695 136 aa2.39□□□□□ -2.03
LINC00560-201ENST00000564593 ZNF660Q6AZW8 331 aaPredicted RBP2.39□□□□□ -2.03
LINC00560-201ENST00000564593 HAGHLQ6PII5 290 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms