RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 DEGS1O15121 323 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 FSTL3O95633 263 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 IGLV2-23P01705 113 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 HLA-DPB1P04440 258 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 S100A2P29034 98 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 MDH2P40926 338 aaKnown RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 SERPINB10P48595 397 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 OR8G1Q15617 311 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 OR8B8Q15620 311 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 DEFB113Q30KQ7 82 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 IZUMO2Q6UXV1 221 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 TCF23Q7RTU1 214 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 MKXQ8IYA7 352 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 BPIFB6Q8NFQ5 453 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 OR5A2Q8NGI9 324 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 OR5AK2Q8NH90 309 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 KLF14Q8TD94 323 aaPredicted RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 ORAOV1Q8WV07 137 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 DCUN1D4Q92564 292 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 FAM104AQ969W3 186 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 GALMQ96C23 342 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 C1QTNF6Q9BXI9 259 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 EIF5A2Q9GZV4 153 aaKnown RBP3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 TAAR3PQ9P1P4 343 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 COPZ2Q9P299 210 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 GNG8Q9UK08 70 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 R4GMQ9 66 aa3.75□□□□□ -1.81
VPS35P1-201ENST00000563400 ZFYVE26Q68DK2 2539 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 SHANK1Q9Y566 2161 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 SETXQ7Z333 2677 aaKnown RBP3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 A0A087WXM4 84 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 A0A0X1KG70 313 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 OR4C45A6NMZ5 311 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 CD300LBA8K4G0 201 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 IQCF6A8MYZ5 107 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 F5H5P2 479 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 J3QLW9 94 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 BMPR1BO00238 502 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 RER1O15258 196 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 CYB5BO43169 146 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 LGALS1P09382 135 aaKnown RBP3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 SCGB1C2P0DMR2 95 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF19P17023 458 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 RBMXP38159 391 aaKnown RBP3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 WNT4P56705 351 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 LINC00313P59037 77 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 GABARAPL2P60520 117 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 TNFAIP6P98066 277 aaPredicted RBP3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 DEFA6Q01524 100 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 FCN2Q15485 313 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 LTC4SQ16873 150 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 TMEM241Q24JQ0 296 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 SGPP2Q8IWX5 399 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 NPBQ8NG41 125 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 SCGB1C1Q8TD33 95 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 CMBLQ96DG6 245 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 BORCS8Q96FH0 119 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 YPEL4Q96NS1 127 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 GGTLC1Q9BX51 225 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 PLA2G12AQ9BZM1 189 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF696Q9H7X3 374 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 PLEKHF2Q9H8W4 249 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 SND1-IT1Q9HBX3 110 aa3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 NUFIP1Q9UHK0 495 aaKnown RBP3.74□□□□□ -1.81
VPS35P1-201ENST00000563400 WDFY3Q8IZQ1 3526 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 DSPP15924 2871 aaKnown RBP3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 INTS1Q8N201 2190 aaKnown RBP3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 IGLV3-9A0A075B6K5 115 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 IGHV3-74A0A0B4J1X5 117 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 IGHV1-69-2A0A0G2JMI3 117 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 DEFB108AA8MXU0 73 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 B4DEV8 164 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 NRASP01111 189 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 GYPBP06028 91 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 MUC1P15941 1255 aaPredicted RBP3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 S100PP25815 95 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 CD200P41217 278 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 RBP2P50120 134 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 KRTAP1-1Q07627 177 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 ENDOGQ14249 297 aaKnown RBP3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 ZNF181Q2M3W8 571 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 IBA57Q5T440 356 aaKnown RBP3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 GLT8D1Q68CQ7 371 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 ZFAND6Q6FIF0 208 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 LYPD2Q6UXB3 125 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 SLC25A40Q8TBP6 338 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 C15orf40Q8WUR7 153 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 MBD3L1Q8WWY6 194 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 GPR146Q96CH1 333 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 MRPS24Q96EL2 167 aaKnown RBP3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 CNBD2Q96M20 576 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 GPR82Q96P67 336 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 NRIP2Q9BQI9 281 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 HSPB9Q9BQS6 159 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 OR2J1Q9GZK6 312 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 PBOV1Q9GZY1 135 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 GTSF1LQ9H1H1 148 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 MED28Q9H204 178 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 CYSLTR1Q9Y271 337 aa3.73□□□□□ -1.81
VPS35P1-201ENST00000563400 LHFPL6Q9Y693 200 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms