RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 HOXA5P20719 270 aa14.99□□□□□ -0.01
SMPD3-203ENST00000563226 MFAP4P55083 255 aa14.99□□□□□ -0.01
SMPD3-203ENST00000563226 ECSCRQ19T08 205 aa14.99□□□□□ -0.01
SMPD3-203ENST00000563226 TMEM219Q86XT9 240 aa14.99□□□□□ -0.01
SMPD3-203ENST00000563226 ZNF320A2RRD8 509 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 IFITM10A6NMD0 228 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 GCGP01275 180 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 SLC25A5P05141 298 aaKnown RBP14.98□□□□□ -0.01
SMPD3-203ENST00000563226 Q56UQ5 140 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 GFI1BQ5VTD9 330 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 RNF125Q96EQ8 232 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 ZNF586Q9NXT0 402 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 C21orf62Q9NYP8 219 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 IL36BQ9NZH7 164 aa14.98□□□□□ -0.01
SMPD3-203ENST00000563226 ISLRO14498 428 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 FABP1P07148 127 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 MGST1P10620 155 aaKnown RBP14.97□□□□□ -0.01
SMPD3-203ENST00000563226 CNN1P51911 297 aaKnown RBP14.97□□□□□ -0.01
SMPD3-203ENST00000563226 TMUB1Q9BVT8 246 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 EPDR1Q9UM22 224 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 RPH3ALQ9UNE2 315 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 FAM208BQ5VWN6 2430 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 WI2-2373I1.2A0A1W2PRP0 233 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 H3BRN7 92 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 TAS2R60P59551 318 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 USF2Q15853 346 aaPredicted RBP14.97□□□□□ -0.01
SMPD3-203ENST00000563226 ACTL10Q5JWF8 245 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 UNQ5815/PRO19632Q6UWF5 114 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 PIFOQ8TCI5 191 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 SGK494Q96LW2 274 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 ZNF48Q96MX3 618 aaPredicted RBP14.97□□□□□ -0.01
SMPD3-203ENST00000563226 SHANK2-AS3Q9BTD1 123 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 Q9H3A6 140 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 EPG5Q9HCE0 2579 aa14.97□□□□□ -0.01
SMPD3-203ENST00000563226 C5orf56Q8N8D9 126 aa14.96□□□□□ -0.01
SMPD3-203ENST00000563226 C12orf57Q99622 126 aa14.96□□□□□ -0.01
SMPD3-203ENST00000563226 TMEM14CQ9P0S9 112 aa14.96□□□□□ -0.01
SMPD3-203ENST00000563226 FBXL7Q9UJT9 491 aa14.96□□□□□ -0.01
SMPD3-203ENST00000563226 OR2T8A6NH00 312 aa14.96□□□□□ -0.02
SMPD3-203ENST00000563226 ZNF98A6NK75 572 aa14.96□□□□□ -0.02
SMPD3-203ENST00000563226 G3V318 75 aa14.96□□□□□ -0.02
SMPD3-203ENST00000563226 YPEL3P61236 119 aaPredicted RBP14.96□□□□□ -0.02
SMPD3-203ENST00000563226 FAM110DQ8TAY7 271 aaPredicted RBP14.96□□□□□ -0.02
SMPD3-203ENST00000563226 THYN1Q9P016 225 aa14.96□□□□□ -0.02
SMPD3-203ENST00000563226 LRRK2Q5S007 2527 aa14.95□□□□□ -0.02
SMPD3-203ENST00000563226 TRAV30A0A087WSZ9 112 aa14.95□□□□□ -0.02
SMPD3-203ENST00000563226 MSMBP08118 114 aa14.95□□□□□ -0.02
SMPD3-203ENST00000563226 HIST1H1BP16401 226 aaKnown RBP14.95□□□□□ -0.02
SMPD3-203ENST00000563226 RPL15P61313 204 aaKnown RBP14.95□□□□□ -0.02
SMPD3-203ENST00000563226 CDX1P47902 265 aaPredicted RBP14.94□□□□□ -0.02
SMPD3-203ENST00000563226 MEOX2P50222 304 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 C17orf77Q96MU5 243 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 OSTCQ9NRP0 149 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 HIST1H1EP10412 219 aaKnown RBP14.94□□□□□ -0.02
SMPD3-203ENST00000563226 COX6B1P14854 86 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 FCGR2BP31994 310 aaPredicted RBP14.94□□□□□ -0.02
SMPD3-203ENST00000563226 PDZD11Q5EBL8 140 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 BAGE2Q86Y30 109 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 TCEAL7Q9BRU2 100 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 CHRDL1Q9BU40 450 aa14.94□□□□□ -0.02
SMPD3-203ENST00000563226 AMY1AP04745 511 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 TMEM183BQ1AE95 376 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 RPEL1Q2QD12 228 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 IBA57Q5T440 356 aaKnown RBP14.93□□□□□ -0.02
SMPD3-203ENST00000563226 EXOC3-AS1Q8N2X6 119 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 C5orf17Q8NAS9 161 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 TMEM68Q96MH6 324 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 C7orf69Q9H7B7 122 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 MRPS12O15235 138 aaKnown RBP14.93□□□□□ -0.02
SMPD3-203ENST00000563226 CTSGP08311 255 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 FRMD6-AS1P0C7T7 363 aa14.93□□□□□ -0.02
SMPD3-203ENST00000563226 S100A8P05109 93 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 IGLC2P0DOY2 106 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 ADMP35318 185 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 OR8I2Q8N0Y5 310 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 HIST3H2BBQ8N257 126 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 ATG101Q9BSB4 218 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 MEGF9Q9H1U4 602 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 MOB4Q9Y3A3 225 aa14.92□□□□□ -0.02
SMPD3-203ENST00000563226 AVPP01185 164 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 TCRAP04437 139 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 UBE2G1P62253 170 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 RHOGP84095 191 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 C15orf32Q32M92 178 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 BPIFA4PQ86YQ2 179 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 ZNF414Q96IQ9 312 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 GPR61Q9BZJ8 451 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 OTORQ9NRC9 128 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 HIF1ANQ9NWT6 349 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 KLF12Q9Y4X4 402 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 ANKRD17O75179 2603 aaKnown RBP14.91□□□□□ -0.02
SMPD3-203ENST00000563226 CA1P00915 261 aaPredicted RBP14.91□□□□□ -0.02
SMPD3-203ENST00000563226 PRB4P10163 310 aaPredicted RBP14.91□□□□□ -0.02
SMPD3-203ENST00000563226 PAX1P15863 534 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 TRAPPC1Q9Y5R8 145 aa14.91□□□□□ -0.02
SMPD3-203ENST00000563226 TRBV19A0A075B6N1 114 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 IGHV3-35A0A0C4DH35 117 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 TCL1AP56279 114 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 KLK9Q2XQG4 91 aa14.9□□□□□ -0.02
SMPD3-203ENST00000563226 ZNF502Q8TBZ5 544 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms