RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 KRBOX1C9JBD0 128 aa10.79□□□□□ -0.68
USP3-221ENST00000561442 NPPCP23582 126 aa10.79□□□□□ -0.68
USP3-221ENST00000561442 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
USP3-221ENST00000561442 USF2Q15853 346 aaPredicted RBP10.79□□□□□ -0.68
USP3-221ENST00000561442 TOR2AQ5JU69 321 aa10.79□□□□□ -0.68
USP3-221ENST00000561442 TMEM252Q8N6L7 170 aa10.79□□□□□ -0.68
USP3-221ENST00000561442 RNF126Q9BV68 326 aa10.79□□□□□ -0.68
USP3-221ENST00000561442 PBDC1Q9BVG4 233 aa10.79□□□□□ -0.68
USP3-221ENST00000561442 ZNF471Q9BX82 626 aaPredicted RBP10.79□□□□□ -0.68
USP3-221ENST00000561442 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 IGKV3-7A0A075B6H7 116 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 E5RGE8 158 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 FABP1P07148 127 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 GATA2P23769 480 aaPredicted RBP10.78□□□□□ -0.68
USP3-221ENST00000561442 LYZP61626 148 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 ALKAL2Q6UX46 152 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 TMEM144Q7Z5S9 345 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 STX12Q86Y82 276 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 LILRB2Q8N423 598 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 RNF125Q96EQ8 232 aa10.78□□□□□ -0.68
USP3-221ENST00000561442 CRYBB3P26998 211 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 BMI1P35226 326 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 SULT1A1P50225 295 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 CD81P60033 236 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 TMEM182Q6ZP80 229 aaPredicted RBP10.77□□□□□ -0.69
USP3-221ENST00000561442 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 GTSCR1Q86UQ5 136 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 BAP18Q8IXM2 172 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 NARS2Q96I59 477 aaKnown RBP10.77□□□□□ -0.69
USP3-221ENST00000561442 VSIRQ9H7M9 311 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 RABAC1Q9UI14 185 aa10.77□□□□□ -0.69
USP3-221ENST00000561442 LSM4Q9Y4Z0 139 aaKnown RBP10.77□□□□□ -0.69
USP3-221ENST00000561442 TRAV25A0A0B4J276 109 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 FNDC10F2Z333 226 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 DFFBO76075 338 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 CD7P09564 240 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 M6PRP20645 277 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 P2RY1P47900 373 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 TFPI2P48307 235 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 EWSR1Q01844 656 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP3-221ENST00000561442 UQCC3Q6UW78 93 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 CYP2G1PQ6ZSU1 146 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 Q8N1Y9 231 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 BPIFCQ8NFQ6 507 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 GGACTQ9BVM4 153 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 TMEM231Q9H6L2 316 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 NPVFQ9HCQ7 196 aa10.76□□□□□ -0.69
USP3-221ENST00000561442 A0A1W2PS18 150 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 TSPAN4O14817 238 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 JTBO76095 146 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 RPL11P62913 178 aaKnown RBP10.75□□□□□ -0.69
USP3-221ENST00000561442 NHLH2Q02577 135 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 RNF141Q8WVD5 230 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
USP3-221ENST00000561442 SLC25A31Q9H0C2 315 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 WFDC10AQ9H1F0 79 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 UQCC1Q9NVA1 299 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 SMAD5-AS1Q9Y6J3 95 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 U3KQE9 123 aa10.75□□□□□ -0.69
USP3-221ENST00000561442 TGP01266 2768 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 UBE2L5PA0A1B0GUS4 154 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 RAB19A4D1S5 217 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 TEX46H3BTG2 121 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 ORM2P19652 201 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 HBG1P69891 147 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 HBG2P69892 147 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 SAT2Q96F10 170 aaPredicted RBP10.74□□□□□ -0.69
USP3-221ENST00000561442 GRAMD2BQ96HH9 432 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 TMEM147Q9BVK8 224 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 DOK5Q9P104 306 aa10.74□□□□□ -0.69
USP3-221ENST00000561442 SORL1Q92673 2214 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 RPL12P30050 165 aaKnown RBP10.73□□□□□ -0.69
USP3-221ENST00000561442 CLINT1Q14677 625 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 C16orf54Q6UWD8 224 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 STPG3Q8N7X2 389 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 OR5C1Q8NGR4 320 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 OR1B1Q8NGR6 318 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 MGST2Q99735 147 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 CYTL1Q9NRR1 136 aa10.73□□□□□ -0.69
USP3-221ENST00000561442 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 AGPAT2O15120 278 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 LINC00869P0C866 280 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 BAXQ07812 192 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 VWC2Q2TAL6 325 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 MS4A6AQ9H2W1 248 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 SLC45A2Q9UMX9 530 aa10.72□□□□□ -0.69
USP3-221ENST00000561442 BORCS7-ASMTA0A0B4J1R7 106 aa10.71□□□□□ -0.69
USP3-221ENST00000561442 DNASE2O00115 360 aaPredicted RBP10.71□□□□□ -0.69
USP3-221ENST00000561442 BUB3O43684 328 aa10.71□□□□□ -0.69
USP3-221ENST00000561442 CD5P06127 495 aa10.71□□□□□ -0.69
USP3-221ENST00000561442 FGF7P21781 194 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms