RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 PMS2P5A8MQ11 134 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 ZNF705EA8MWA4 302 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-210ENST00000559092 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 TSC22D2O75157 780 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 MIFP14174 115 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 PSMB3P49720 205 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 PAX9P55771 341 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 ZBTB8BQ8NAP8 495 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-210ENST00000559092 C11orf45Q8TAV5 145 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 WDR12Q9GZL7 423 aaKnown RBP12.81□□□□□ -0.36
SMAD3-210ENST00000559092 GSKIPQ9P0R6 139 aa12.81□□□□□ -0.36
SMAD3-210ENST00000559092 ISLRO14498 428 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 C4BPBP20851 252 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 GALR1P47211 349 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 MEOX2P50222 304 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 SELENOTP62341 195 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 SPATA31B1PQ5VZV4 182 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 Q8NAQ8 132 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 CSNK1G2-AS1Q8NCQ2 148 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 PHLDA1Q8WV24 401 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-210ENST00000559092 S100ZQ8WXG8 99 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 CLUHP3Q96NS8 147 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 TMEM147Q9BVK8 224 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
SMAD3-210ENST00000559092 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 SOCS3O14543 225 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 ORM2P19652 201 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 DLK1P80370 383 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 TMEM182Q6ZP80 229 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-210ENST00000559092 OR10P1Q8NGE3 313 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 ZNF431Q8TF32 576 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-210ENST00000559092 LINC00052Q96N35 136 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 GPR82Q96P67 336 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 HRH4Q9H3N8 390 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 NPVFQ9HCQ7 196 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 NUDT15Q9NV35 164 aa12.79□□□□□ -0.36
SMAD3-210ENST00000559092 SMCO3A2RU48 225 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 MBPP02686 304 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-210ENST00000559092 IL5P05113 134 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 GATA2P23769 480 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-210ENST00000559092 ZNF846Q147U1 533 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 FOXI2Q6ZQN5 318 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 CYP2G1PQ6ZSU1 146 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 S100A7AQ86SG5 101 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 GGACTQ9BVM4 153 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 SAV1Q9H4B6 383 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-210ENST00000559092 TBC1D24Q9ULP9 559 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 RCL1Q9Y2P8 373 aaKnown RBP12.78□□□□□ -0.36
SMAD3-210ENST00000559092 ALMS1Q8TCU4 4167 aa12.78□□□□□ -0.36
SMAD3-210ENST00000559092 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 K7EPK0 472 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 METTL15P1P0C7V9 234 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 PLP1P60201 277 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
SMAD3-210ENST00000559092 MZT2BQ6NZ67 158 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 RSG1Q9BU20 258 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 MGAT4CQ9UBM8 478 aa12.77□□□□□ -0.37
SMAD3-210ENST00000559092 IGHV4-28A0A0C4DH34 117 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 FAM240BA0A1B0GVZ2 78 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 C7orf66A4D0T2 115 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 DEFB4AO15263 64 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 HYPMO75409 117 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 DEDDO75618 318 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 TEPPQ6URK8 271 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 LINC00476Q8WZB0 136 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 SLC25A22Q9H936 323 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 CLEC5AQ9NY25 188 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 X6R8D5 127 aa12.76□□□□□ -0.37
SMAD3-210ENST00000559092 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
SMAD3-210ENST00000559092 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 RAP2BP61225 183 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 RRAS2P62070 204 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-210ENST00000559092 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
SMAD3-210ENST00000559092 HYDINQ4G0P3 5121 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 C12orf45Q8N5I9 185 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-210ENST00000559092 C16orf92Q96LL3 132 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 SHANK2-AS3Q9BTD1 123 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 SLC25A39Q9BZJ4 359 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-210ENST00000559092 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 XCL2Q9UBD3 114 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 RNF24Q9Y225 148 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 HIGD1AQ9Y241 93 aa12.75□□□□□ -0.37
SMAD3-210ENST00000559092 A6NHS1 94 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 L7N2F9 121 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 CCNKO75909 580 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 LINC00869P0C866 280 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 VAMP2P63027 116 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 ASAH1Q13510 395 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 PXDC1Q5TGL8 231 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 GDF5OSQ5U4N7 250 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 C2orf50Q96LR7 162 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 SEC22CQ9BRL7 303 aa12.74□□□□□ -0.37
SMAD3-210ENST00000559092 C5orf51A6NDU8 294 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms