RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 VWC2LB2RUY7 222 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 H3BTX0 84 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 CRXO43186 299 aaPredicted RBP4.12□□□□□ -1.75
HMG20A-204ENST00000558288 COX8AP10176 69 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 ZNF134P52741 427 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 SMAGPQ0VAQ4 97 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 Q0VFX4 171 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 TM4SF20Q53R12 229 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 C10orf113Q5VZT2 155 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 FAM231DQ6ZW35 169 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 ATP5L2Q7Z4Y8 100 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 ZNF329Q86UD4 541 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 H1FXQ92522 213 aaKnown RBP4.12□□□□□ -1.75
HMG20A-204ENST00000558288 MBD6Q96DN6 1003 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 JMJD8Q96S16 334 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 SLC25A2Q9BXI2 301 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 GTSF1LQ9H1H1 148 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 JKAMPQ9P055 326 aa4.12□□□□□ -1.75
HMG20A-204ENST00000558288 PGPA6NDG6 321 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 K7EP34 96 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 LYZL6O75951 148 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 PRDX2P32119 198 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 KIR2DS2P43631 304 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 KIR3DS1Q14943 382 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 GUSBP1Q15486 140 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 ZNF766Q5HY98 468 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 WDR82Q6UXN9 313 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 FA2HQ7L5A8 372 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 PDPNQ86YL7 162 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 KLF14Q8TD94 323 aaPredicted RBP4.11□□□□□ -1.75
HMG20A-204ENST00000558288 PERPQ96FX8 193 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 C19orf24Q9BVV8 132 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 CXXC4Q9H2H0 198 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 THYN1Q9P016 225 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 JPT1Q9UK76 154 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.11□□□□□ -1.75
HMG20A-204ENST00000558288 C15orf65H3BRN8 121 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 APOHP02749 345 aaPredicted RBP4.11□□□□□ -1.75
HMG20A-204ENST00000558288 CD46P15529 392 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 ORM2P19652 201 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 REG1BP48304 166 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 VWA1Q6PCB0 445 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 TMEM108Q6UXF1 575 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 GFRALQ6UXV0 394 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 CD177Q8N6Q3 437 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 OR10W1Q8NGF6 305 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 ADTRPQ96IZ2 230 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 MRPL32Q9BYC8 188 aaKnown RBP4.11□□□□□ -1.75
HMG20A-204ENST00000558288 IFI27L2Q9H2X8 130 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 AP5S1Q9NUS5 200 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 RABAC1Q9UI14 185 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 PRNDQ9UKY0 176 aa4.11□□□□□ -1.75
HMG20A-204ENST00000558288 FOXA2Q9Y261 457 aaPredicted RBP4.11□□□□□ -1.75
HMG20A-204ENST00000558288 F11RQ9Y624 299 aaKnown RBP4.11□□□□□ -1.75
HMG20A-204ENST00000558288 LOC389332A0A1B0GUA5 103 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 H3BRM9 83 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 SAA2P0DJI9 122 aaPredicted RBP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 NMUP48645 174 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 RBPJQ06330 500 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 SRSF1Q07955 248 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 ABHD17BQ5VST6 288 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 C2orf91Q6ZV80 131 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 ZNRF1Q8ND25 227 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 OR4A5Q8NH83 315 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 TNFRSF14Q92956 283 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 FAM173AQ9BQD7 235 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 TMEM14BQ9NUH8 114 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 ZNF835Q9Y2P0 537 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 TEX50A0A1B0GTY4 177 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 A0A1B0GXF2 115 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 IQCF6A8MYZ5 107 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 PRB4P10163 310 aaPredicted RBP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 FABP2P12104 132 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 HOXC12P31275 282 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 CSN1S1P47710 185 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 SSBP2P81877 361 aaPredicted RBP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 MEF2CQ06413 473 aaPredicted RBP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 UTF1Q5T230 341 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 PPP1R32Q7Z5V6 425 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 PPP1R35Q8TAP8 253 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 C1RLQ9NZP8 487 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 PPIAL4CA0A0B4J2A2 164 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 WISP2O76076 250 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 NCR2O95944 276 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 MOSP00540 346 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 PPIAL4GP0DN37 164 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 UFSP1Q6NVU6 142 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 RBPMS2Q6ZRY4 209 aaKnown RBP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 C1orf229Q6ZS94 237 aaPredicted RBP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 LINC00305Q7Z4B0 112 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 C11orf53Q8IXP5 236 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 OR2Z1Q8NG97 314 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 OR1L4Q8NGR5 311 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 VSTM2AQ8TAG5 236 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 RND1Q92730 232 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 FLYWCH2Q96CP2 140 aaKnown RBP4.1□□□□□ -1.75
HMG20A-204ENST00000558288 FAM167A-AS1Q96KT0 104 aa4.1□□□□□ -1.75
HMG20A-204ENST00000558288 GPR82Q96P67 336 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms