RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 C3orf56Q8N813 242 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 OR1B1Q8NGR6 318 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 GPR82Q96P67 336 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 OR5B12Q96R08 314 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 CITED1Q99966 193 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 PBDC1Q9BVG4 233 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 ELOVL1Q9BW60 279 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 SH3BGRL3Q9H299 93 aa9.55□□□□□ -0.88
TPM1-209ENST00000558072 DAZ1Q9NQZ3 744 aaKnown RBP9.55□□□□□ -0.88
TPM1-209ENST00000558072 ZNF320A2RRD8 509 aa9.54□□□□□ -0.88
TPM1-209ENST00000558072 PPP5D1E7EU14 171 aa9.54□□□□□ -0.88
TPM1-209ENST00000558072 CCL24O00175 119 aa9.54□□□□□ -0.88
TPM1-209ENST00000558072 CDC34P49427 236 aaPredicted RBP9.54□□□□□ -0.88
TPM1-209ENST00000558072 RIPPLY3P57055 190 aa9.54□□□□□ -0.88
TPM1-209ENST00000558072 ALKAL2Q6UX46 152 aa9.54□□□□□ -0.88
TPM1-209ENST00000558072 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
TPM1-209ENST00000558072 TECRQ9NZ01 308 aaKnown RBP9.54□□□□□ -0.88
TPM1-209ENST00000558072 MRPL27Q9P0M9 148 aaKnown RBP9.54□□□□□ -0.88
TPM1-209ENST00000558072 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
TPM1-209ENST00000558072 IGHV4OR15-8A0A075B7B6 117 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 A0A087WW49 117 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 CTXND1A0A1B0GTU2 59 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 A0A1W2PRX2 142 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 SEC14L6B5MCN3 397 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 HOXD3P31249 432 aaPredicted RBP9.53□□□□□ -0.88
TPM1-209ENST00000558072 MEOX2P50222 304 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 PPT1P50897 306 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 FHL3Q13643 280 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 KLF5Q13887 457 aaPredicted RBP9.53□□□□□ -0.88
TPM1-209ENST00000558072 KHDC3LQ587J8 217 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 FAM78BQ5VT40 261 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 PQLC2Q6ZP29 291 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 LINC00305Q7Z4B0 112 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 C20orf24Q9BUV8 137 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 RPRMQ9NS64 109 aa9.53□□□□□ -0.88
TPM1-209ENST00000558072 ZNF705EA8MWA4 302 aaPredicted RBP9.52□□□□□ -0.89
TPM1-209ENST00000558072 A8MWP6 167 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 TRBV12-3P01733 135 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 PF4P02776 101 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 H2AFB1P0C5Y9 115 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 C8orf88P0DMB2 117 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 RPL7P18124 248 aaKnown RBP9.52□□□□□ -0.89
TPM1-209ENST00000558072 GATA2P23769 480 aaPredicted RBP9.52□□□□□ -0.89
TPM1-209ENST00000558072 CRYBB3P26998 211 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 SAMD13Q5VXD3 122 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
TPM1-209ENST00000558072 RGS13O14921 159 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 CXorf1O96002 111 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
TPM1-209ENST00000558072 NSUN5P1Q3KNT7 163 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 FAM122CQ6P4D5 195 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 BPIFA4PQ86YQ2 179 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 MBD3L1Q8WWY6 194 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 TMEM37Q8WXS4 190 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 SHANK2-AS3Q9BTD1 123 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 SLC25A39Q9BZJ4 359 aaPredicted RBP9.51□□□□□ -0.89
TPM1-209ENST00000558072 TMEM167BQ9NRX6 74 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 DOK5Q9P104 306 aa9.51□□□□□ -0.89
TPM1-209ENST00000558072 TRAV1-1A0A0B4J248 108 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 HELTA6NFD8 242 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 ZNF98A6NK75 572 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 GALR1P47211 349 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
TPM1-209ENST00000558072 OR8I2Q8N0Y5 310 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
TPM1-209ENST00000558072 OR9G4Q8NGQ1 327 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 RAB24Q969Q5 203 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 RCC1LQ96I51 464 aaKnown RBP9.5□□□□□ -0.89
TPM1-209ENST00000558072 RAX2Q96IS3 184 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 DUX3Q96PT4 197 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 TMEM14CQ9P0S9 112 aa9.5□□□□□ -0.89
TPM1-209ENST00000558072 IGHV7-4-1A0A0J9YVY3 117 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 H3BRN7 92 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 OVOL1O14753 267 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 IFNA1P01562 189 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 STAG3L2P0CL84 134 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 STAG3L3P0CL85 134 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 PSMB3P49720 205 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 GUK1Q16774 197 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 PATE2Q6UY27 113 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 SFT2D1Q8WV19 159 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 MCRIP2Q9BUT9 160 aaKnown RBP9.49□□□□□ -0.89
TPM1-209ENST00000558072 GPR61Q9BZJ8 451 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 SMPXQ9UHP9 88 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 U3KQE9 123 aa9.49□□□□□ -0.89
TPM1-209ENST00000558072 ADARB2-AS1A8MUL3 147 aa9.48□□□□□ -0.89
TPM1-209ENST00000558072 BUB3O43684 328 aa9.48□□□□□ -0.89
TPM1-209ENST00000558072 OR7C2O60412 319 aa9.48□□□□□ -0.89
TPM1-209ENST00000558072 PMS2P11Q13670 270 aa9.48□□□□□ -0.89
TPM1-209ENST00000558072 CLLU1Q5K131 121 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms