RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 OR11H7Q8NGC8 314 aa12.74□□□□□ -0.37
ABCD4-228ENST00000557588 GLYATL2Q8WU03 294 aa12.74□□□□□ -0.37
ABCD4-228ENST00000557588 VPS13BQ7Z7G8 4022 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 ZFP92A6NM28 416 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 M0R2Z0 102 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 CD3DP04234 171 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 LYZP61626 148 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 SPINK13Q1W4C9 94 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 OR8I2Q8N0Y5 310 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 UPK3BQ9BT76 320 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 COMMD3Q9UBI1 195 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 CACFD1Q9UGQ2 172 aa12.73□□□□□ -0.37
ABCD4-228ENST00000557588 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
ABCD4-228ENST00000557588 FCN2Q15485 313 aa12.72□□□□□ -0.37
ABCD4-228ENST00000557588 BAP18Q8IXM2 172 aa12.72□□□□□ -0.37
ABCD4-228ENST00000557588 SELENOHQ8IZQ5 122 aaKnown RBP12.72□□□□□ -0.37
ABCD4-228ENST00000557588 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
ABCD4-228ENST00000557588 TERB2Q8NHR7 220 aa12.72□□□□□ -0.37
ABCD4-228ENST00000557588 FABP1P07148 127 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 AZU1P20160 251 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 MEF2DQ14814 521 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 OR4D10Q8NGI6 311 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 MARCH1Q8TCQ1 289 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 PPP1R14BQ96C90 147 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 ZNF503Q96F45 646 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 C17orf77Q96MU5 243 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 NAA60Q9H7X0 242 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 U3KQ87 197 aa12.71□□□□□ -0.37
ABCD4-228ENST00000557588 TEX13DA0A0J9YY54 714 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-228ENST00000557588 DUSP14O95147 198 aaKnown RBP12.7□□□□□ -0.38
ABCD4-228ENST00000557588 GALR1P47211 349 aa12.7□□□□□ -0.38
ABCD4-228ENST00000557588 GAMTQ14353 236 aa12.7□□□□□ -0.38
ABCD4-228ENST00000557588 RNASE12Q5GAN4 147 aaKnown RBP12.7□□□□□ -0.38
ABCD4-228ENST00000557588 Q5VSD8 79 aa12.7□□□□□ -0.38
ABCD4-228ENST00000557588 GPR141Q7Z602 305 aa12.7□□□□□ -0.38
ABCD4-228ENST00000557588 SLC25A32Q9H2D1 315 aa12.7□□□□□ -0.38
ABCD4-228ENST00000557588 Q9H521 79 aa12.7□□□□□ -0.38
ABCD4-228ENST00000557588 SNRPGP15A8MWD9 76 aa12.69□□□□□ -0.38
ABCD4-228ENST00000557588 LSM3P62310 102 aaKnown RBP12.69□□□□□ -0.38
ABCD4-228ENST00000557588 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
ABCD4-228ENST00000557588 TMEM268Q5VZI3 342 aa12.69□□□□□ -0.38
ABCD4-228ENST00000557588 LGI3Q8N145 548 aa12.69□□□□□ -0.38
ABCD4-228ENST00000557588 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
ABCD4-228ENST00000557588 MTFP1Q9UDX5 166 aa12.69□□□□□ -0.38
ABCD4-228ENST00000557588 BOLA2-SMG1P6H3BVE0 249 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 TNFAIP8O95379 198 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 SULT1A3P0DMM9 295 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 SULT1A4P0DMN0 295 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 GPX4P36969 197 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-228ENST00000557588 XGP55808 180 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 Q6ZRN7 208 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-228ENST00000557588 TMEM256Q8N2U0 113 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 OR52I2Q8NH67 350 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 DTD1Q8TEA8 209 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 C16orf74Q96GX8 76 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-228ENST00000557588 HSPB7Q9UBY9 170 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 MRPS16Q9Y3D3 137 aaKnown RBP12.68□□□□□ -0.38
ABCD4-228ENST00000557588 TMEM56-RWDD3S4R434 201 aa12.68□□□□□ -0.38
ABCD4-228ENST00000557588 FLG2Q5D862 2391 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-228ENST00000557588 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 HPGDSO60760 199 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 GABARAPO95166 117 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 ATP5IP56385 69 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-228ENST00000557588 TAS2R60P59551 318 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 DLK1P80370 383 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 OR2F1Q13607 317 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 RXFP4Q8TDU9 374 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 YIPF6Q96EC8 236 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 GNPNAT1Q96EK6 184 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-228ENST00000557588 UHRF2Q96PU4 802 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 TRGV9Q99603 122 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 RSG1Q9BU20 258 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 SLC45A2Q9UMX9 530 aa12.67□□□□□ -0.38
ABCD4-228ENST00000557588 C14orf166Q9Y224 244 aaKnown RBP12.67□□□□□ -0.38
ABCD4-228ENST00000557588 TIMM8BQ9Y5J9 83 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-228ENST00000557588 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 CRYM-AS1A6NIL9 109 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 M6PRP20645 277 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 LINC00315P59091 139 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 GPR107Q5VW38 600 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 CDPF1Q6NVV7 123 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 TMEM229BQ8NBD8 167 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 OR4D5Q8NGN0 318 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 RNASE8Q8TDE3 154 aaKnown RBP12.66□□□□□ -0.38
ABCD4-228ENST00000557588 FRZBQ92765 325 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 SLC25A22Q9H936 323 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 PTTG2Q9NZH5 202 aa12.66□□□□□ -0.38
ABCD4-228ENST00000557588 IGKV1OR2-108A0A075B7D4 117 aa12.65□□□□□ -0.38
ABCD4-228ENST00000557588 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
ABCD4-228ENST00000557588 RAB3DO95716 219 aa12.65□□□□□ -0.38
ABCD4-228ENST00000557588 TAS2R19P59542 299 aa12.65□□□□□ -0.38
ABCD4-228ENST00000557588 SURF2Q15527 256 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-228ENST00000557588 ESRGQ1W209 222 aa12.65□□□□□ -0.38
ABCD4-228ENST00000557588 THAP8Q8NA92 274 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms