RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 RPEQ96AT9 228 aa4.29□□□□□ -1.72
PCNX1-214ENST00000556849 RAB37Q96AX2 223 aa4.29□□□□□ -1.72
PCNX1-214ENST00000556849 LINC01600Q96MT4 127 aa4.29□□□□□ -1.72
PCNX1-214ENST00000556849 MLST8Q9BVC4 326 aa4.29□□□□□ -1.72
PCNX1-214ENST00000556849 PLEKHA3Q9HB20 300 aa4.29□□□□□ -1.72
PCNX1-214ENST00000556849 ZNF355PQ9NSJ1 428 aa4.29□□□□□ -1.72
PCNX1-214ENST00000556849 FOXA2Q9Y261 457 aaPredicted RBP4.29□□□□□ -1.72
PCNX1-214ENST00000556849 ATG2BQ96BY7 2078 aa4.29□□□□□ -1.72
PCNX1-214ENST00000556849 SNRNP200O75643 2136 aaKnown RBP4.28□□□□□ -1.72
PCNX1-214ENST00000556849 SPTBP11277 2137 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 LINC01546A6NGU7 62 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 FABP5P3A8MUU1 101 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 PEX7O00628 323 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 SS18L1O75177 396 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-214ENST00000556849 FCN3O75636 299 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 APOHP02749 345 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-214ENST00000556849 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 SP1P08047 785 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 EVI2AP22794 236 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 MYCNOSP40205 109 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 KIR2DS2P43631 304 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 FXYD2P54710 66 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 XGP55808 180 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 BRWD1-AS2P59051 145 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 ATP5G2Q06055 141 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 POU2AF1Q16633 256 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 DEFB110Q30KQ9 67 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 C12orf74Q32Q52 190 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 LYRM7Q5U5X0 104 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 Q6ZR03 302 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 ZNF493Q6ZR52 646 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 SLC25A48Q6ZT89 311 aaKnown RBP4.28□□□□□ -1.72
PCNX1-214ENST00000556849 MIR17HGQ75NE6 70 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 SH2D6Q7Z4S9 175 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 ABHD12Q8N2K0 398 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 CCL4L1Q8NHW4 92 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 TMEM158Q8WZ71 300 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 PRELID3AQ96N28 172 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 NABP2Q9BQ15 211 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 C20orf78Q9BR46 151 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 TPPP3Q9BW30 176 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 SSBP3Q9BWW4 388 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-214ENST00000556849 OR2H1Q9GZK4 316 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 OCIAD1Q9NX40 245 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 AMMECR1Q9Y4X0 333 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-214ENST00000556849 U3KQK5 164 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 SHANK1Q9Y566 2161 aa4.28□□□□□ -1.72
PCNX1-214ENST00000556849 PHF3Q92576 2039 aaKnown RBP4.28□□□□□ -1.73
PCNX1-214ENST00000556849 FBLL1A6NHQ2 334 aaKnown RBP4.27□□□□□ -1.73
PCNX1-214ENST00000556849 LILRA5A6NI73 299 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 C17orf98A8MV24 154 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 C10orf142B7Z368 130 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 J3QT63 122 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 CHEK1O14757 476 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 SPINT2O43291 252 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 NCR2O95944 276 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 ZNF32P17041 273 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 GNG3P63215 75 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 PAX8Q06710 450 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 RIGQ13278 110 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-214ENST00000556849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.27□□□□□ -1.73
PCNX1-214ENST00000556849 ZNF329Q86UD4 541 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 TEN1Q86WV5 123 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 RPS19BP1Q86WX3 136 aaKnown RBP4.27□□□□□ -1.73
PCNX1-214ENST00000556849 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 NFAM1Q8NET5 270 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-214ENST00000556849 SLC37A2Q8TED4 501 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 DDB2Q92466 427 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 NRGNQ92686 78 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 PTH2Q96A98 100 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 FMC1Q96HJ9 113 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 ZNF414Q96IQ9 312 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 FAM167A-AS1Q96KT0 104 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 ZNF714Q96N38 554 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 C18orf15Q96N68 181 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 NAA38Q9BRA0 125 aaKnown RBP4.27□□□□□ -1.73
PCNX1-214ENST00000556849 CHAC1Q9BUX1 264 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 FGF23Q9GZV9 251 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-214ENST00000556849 MAP1LC3AQ9H492 121 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 CACNA1CQ13936 2221 aa4.27□□□□□ -1.73
PCNX1-214ENST00000556849 TRBV20-1A0A075B6N2 111 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 A0A096LNJ9 63 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 OVOL3O00110 214 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 SNAI2O43623 268 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 SCGB2A1O75556 95 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 P01737 135 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 HBDP02042 147 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 SLC25A5P05141 298 aaKnown RBP4.26□□□□□ -1.73
PCNX1-214ENST00000556849 CELA2AP08217 269 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 ZNF688P0C7X2 276 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 TNFRSF4P43489 277 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
PCNX1-214ENST00000556849 HSPE1P61604 102 aaKnown RBP4.26□□□□□ -1.73
PCNX1-214ENST00000556849 ZNF816Q0VGE8 651 aaPredicted RBP4.26□□□□□ -1.73
PCNX1-214ENST00000556849 ZNF542PQ5EBM4 170 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 ACP7Q6ZNF0 438 aa4.26□□□□□ -1.73
PCNX1-214ENST00000556849 YRDCQ86U90 279 aaKnown RBP4.26□□□□□ -1.73
PCNX1-214ENST00000556849 TMEM178AQ8NBL3 297 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms