RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ORC5O43913 435 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 HTR1AP08908 422 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 RNASE4P34096 147 aaKnown RBP1.48□□□□□ -2.17
SCFD1-221ENST00000556534 YPEL3P61236 119 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-221ENST00000556534 RHEBQ15382 184 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 C7orf65Q6ZTY9 151 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 TRAPPC6BQ86SZ2 158 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 OR5A1Q8NGJ0 315 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 OR8D4Q8NGM9 314 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 STAG3L4Q8TBR4 150 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 FAM172AQ8WUF8 416 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 SLAMF6Q96DU3 332 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 SH3BGRL3Q9H299 93 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 EFCAB6Q5THR3 1501 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 SPHKAPQ2M3C7 1700 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 RICTORQ6R327 1708 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 SETD5Q9C0A6 1442 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 ABCA5Q8WWZ7 1642 aa1.48□□□□□ -2.17
SCFD1-221ENST00000556534 FASNP49327 2511 aaKnown RBP1.47□□□□□ -2.17
SCFD1-221ENST00000556534 TONSLQ96HA7 1378 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 NAV2Q8IVL1 2488 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 USP34Q70CQ2 3546 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 AGLP35573 1532 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 MAP3K1Q13233 1512 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.47□□□□□ -2.17
SCFD1-221ENST00000556534 ABCA10Q8WWZ4 1543 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 BPTFQ12830 3046 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 PRDM2Q13029 1718 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 ANAPC1Q9H1A4 1944 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 IFNA7P01567 189 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 PMP2P02689 132 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 METTL15P1P0C7V9 234 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 COX6A1P12074 109 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 FKBP2P26885 142 aaKnown RBP1.47□□□□□ -2.17
SCFD1-221ENST00000556534 PHBP35232 272 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 NDUFA5Q16718 116 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 RRN3P1Q2M238 152 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 KRTAP21-3Q3LHN1 58 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 KHDC3LQ587J8 217 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 AKR1C8PQ5T2L2 129 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 LYRM7Q5U5X0 104 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 TRIQKQ629K1 86 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 SELENOSQ9BQE4 189 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 LYRM2Q9NU23 88 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-221ENST00000556534 SMPXQ9UHP9 88 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 ATPIF1Q9UII2 106 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 A2ML1A8K2U0 1454 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 A2MP01023 1474 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 HEATR5BQ9P2D3 2071 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 CFAP54Q96N23 3096 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 RIC1Q4ADV7 1423 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 DEPDC5O75140 1603 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 C5orf42Q9H799 3197 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 NRKQ7Z2Y5 1582 aa1.47□□□□□ -2.17
SCFD1-221ENST00000556534 MYOM1P52179 1685 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 CAMSAP2Q08AD1 1489 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 NUP98P52948 1817 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 A0A0D9SG52 128 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 TMEM212A6NML5 194 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 H7C1C5 153 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 M0R378 163 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 TAX1BP3O14907 124 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 NDUFC2O95298 119 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 TCL1BO95988 128 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 LCN6P62502 163 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 C3orf33Q6P1S2 294 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 ZNF826PQ6ZT77 177 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 DEFB128Q7Z7B8 93 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 WFDC11Q8NEX6 87 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 OR13D1Q8NGV5 346 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 AQP3Q92482 292 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 LYSMD1Q96S90 227 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 HIST1H2BLQ99880 126 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 IMUPQ9GZP8 106 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 PCBD2Q9H0N5 130 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 BIN3Q9NQY0 253 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 C8orf4Q9NR00 106 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 ACER3Q9NUN7 267 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 N4BP2Q86UW6 1770 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-221ENST00000556534 PTPN13Q12923 2485 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 POLR1AO95602 1720 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-221ENST00000556534 PRUNE2Q8WUY3 3088 aa1.46□□□□□ -2.18
SCFD1-221ENST00000556534 ABCC3O15438 1527 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 EHBP1L1Q8N3D4 1523 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 FAM135AQ9P2D6 1515 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 ZNF462Q96JM2 2506 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 WIZO95785 1651 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 REV3LO60673 3130 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 ABCA9Q8IUA7 1624 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 MYO3AQ8NEV4 1616 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 ZFHX2Q9C0A1 2572 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-221ENST00000556534 SDCBPO00560 298 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-221ENST00000556534 BANF1O75531 89 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 PIAS1O75925 651 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 CSN2P05814 226 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 GPX2P18283 190 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 SERPINB1P30740 379 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 GLRXP35754 106 aa1.45□□□□□ -2.18
SCFD1-221ENST00000556534 TSNQ15631 228 aaKnown RBP1.45□□□□□ -2.18
SCFD1-221ENST00000556534 SNCBQ16143 134 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms