RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 YPEL1O60688 119 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 OR2A4O95047 310 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 IGKV4-1P06312 121 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 CRYGBP07316 175 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 CTSDP07339 412 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 IGKV1-13P0DP09 117 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 HTN3P15516 51 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 GZMHP20718 246 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 CBLN1P23435 193 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 NFYAP23511 347 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 HLA-DMBP28068 263 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 LGALS7P47929 136 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 KCNJ3P48549 501 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 EMP1P54849 157 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 OR10A3P58181 314 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 OR2B8PP59922 312 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 SNRPGP62308 76 aaKnown RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 RPS25P62851 125 aaKnown RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM267Q0VDI3 215 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 GPR176Q14439 515 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 PRSS8Q16651 343 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 MPV17LQ2QL34 196 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 Q499Y3 187 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 DNAL1Q4LDG9 190 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 PYHIN1Q6K0P9 492 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 CD200R1LQ6Q8B3 271 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 ASCL4Q6XD76 172 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 AHSA2Q719I0 299 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 SLC16A13Q7RTY0 426 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 LINC00596Q86U02 117 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 SLC38A6Q8IZM9 456 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 SYS1Q8N2H4 156 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 CYB561D1Q8N8Q1 229 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF709Q8N972 641 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 Q8N976 141 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 C8orf31Q8N9H6 132 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 CCDC54Q8NEL0 328 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 OR1L6Q8NGR2 347 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 OR11H2Q8NH07 326 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 CD300LFQ8TDQ1 290 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 THRSPQ92748 146 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 SMIM19Q96E16 107 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 SEC22AQ96IW7 307 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 DERL3Q96Q80 235 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 YPEL2Q96QA6 119 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 TSNAXQ99598 290 aaKnown RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF2Q9BSG1 426 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 HINT2Q9BX68 163 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM59Q9BXS4 323 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 PECRQ9BY49 303 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 MED4Q9NPJ6 270 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 NUDT15Q9NV35 164 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 SDHAF2Q9NX18 166 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 TAS2R8Q9NYW2 309 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 IL36GQ9NZH8 169 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 ABRACLQ9P1F3 81 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 ENOPH1Q9UHY7 261 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 ERGIC3Q9Y282 383 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 RBM7Q9Y580 266 aaKnown RBP1.62□□□□□ -2.15
SCFD1-219ENST00000556413 DSCAML1Q8TD84 2053 aa1.62□□□□□ -2.15
SCFD1-219ENST00000556413 RNF213Q63HN8 5207 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 LOC100130705A0A1B0GUX0 176 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 MEIS3P1A6NDR6 274 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 SULT1C2O00338 296 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 MYL12BO14950 172 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 NUPL2O15504 423 aaKnown RBP1.61□□□□□ -2.15
SCFD1-219ENST00000556413 FABP7O15540 132 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 GGCTO75223 188 aaKnown RBP1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CIB2O75838 187 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 SC5DO75845 299 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 YIF1AO95070 293 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 NAPSAO96009 420 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 PRM2P04554 102 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 GLAP06280 429 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CD2P06729 351 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 GNAO1P09471 354 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 HSMCR30P0CW71 290 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 MYL12AP19105 171 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CELP19835 753 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CD40LGP29965 261 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CXCL5P42830 114 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 MAP2K4P45985 399 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 RPL27AP46776 148 aaKnown RBP1.61□□□□□ -2.15
SCFD1-219ENST00000556413 P2RY1P47900 373 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 FXYD4P59646 89 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 KIAA0087Q14695 138 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 TATDN3Q17R31 274 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 VMA21Q3ZAQ7 101 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 AKIRIN2Q53H80 203 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM41BQ5BJD5 291 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 LGALS9CQ6DKI2 356 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 LAIR2Q6ISS4 152 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 RPL22L1Q6P5R6 122 aaKnown RBP1.61□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF880Q6PDB4 577 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 SLC25A34Q6PIV7 304 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 Q6ZN92 141 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 PDPNQ86YL7 162 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 UBE2DNLQ8IWF7 75 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 GAPTQ8N292 157 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 DHRSXQ8N5I4 330 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms