RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 H3BP45 60 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 TCRBP04435 133 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 PSMB3P49720 205 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 IFITM3Q01628 133 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 ASAH1Q13510 395 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 Q8NAQ8 132 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 C20orf85Q9H1P6 137 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 CLEC5AQ9NY25 188 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 PSENENQ9NZ42 101 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 SLC45A2Q9UMX9 530 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 RYR2Q92736 4967 aa12.88□□□□□ -0.35
FOXN3-204ENST00000553840 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 IGHV4-28A0A0C4DH34 117 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 ZNF705EA8MWA4 302 aaPredicted RBP12.87□□□□□ -0.35
FOXN3-204ENST00000553840 PRSS46E5RG02 174 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 H3BMM0 161 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 HLA-DRB4P13762 266 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 C2CD4CQ8TF44 421 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 HLA-DRB4X5D2U9 266 aa12.87□□□□□ -0.35
FOXN3-204ENST00000553840 SACSQ9NZJ4 4579 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 SMCO3A2RU48 225 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 C11orf94C9JXX5 98 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 SSSCA1O60232 199 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 GALR1P47211 349 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 MEOX2P50222 304 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 POLR2GP62487 172 aaKnown RBP eCLIP12.86□□□□□ -0.35
FOXN3-204ENST00000553840 CSNK1G2-AS1Q8NCQ2 148 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 NUDT15Q9NV35 164 aa12.86□□□□□ -0.35
FOXN3-204ENST00000553840 ISLRO14498 428 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 ORM2P19652 201 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 TCTAP57738 103 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 FOXI2Q6ZQN5 318 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 TMEM144Q7Z5S9 345 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 OR4D5Q8NGN0 318 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 ENKURQ8TC29 256 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 SMIM8Q96KF7 97 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 GPR82Q96P67 336 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 TMEM147Q9BVK8 224 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 SAV1Q9H4B6 383 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-204ENST00000553840 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 XCL2Q9UBD3 114 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 X6R8D5 127 aa12.85□□□□□ -0.35
FOXN3-204ENST00000553840 SCGB1D2O95969 90 aa12.84□□□□□ -0.35
FOXN3-204ENST00000553840 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
FOXN3-204ENST00000553840 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
FOXN3-204ENST00000553840 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
FOXN3-204ENST00000553840 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
FOXN3-204ENST00000553840 IAH1Q2TAA2 248 aaPredicted RBP12.84□□□□□ -0.35
FOXN3-204ENST00000553840 EBLN2Q6P2I7 272 aa12.84□□□□□ -0.35
FOXN3-204ENST00000553840 C16orf92Q96LL3 132 aa12.84□□□□□ -0.35
FOXN3-204ENST00000553840 ZNF98A6NK75 572 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 IL5P05113 134 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 DEFA1P59665 94 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 DEFA3P59666 94 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 LGALS9CQ6DKI2 356 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 S100A7AQ86SG5 101 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 MITD1Q8WV92 249 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 RPRMQ9NS64 109 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 GSKIPQ9P0R6 139 aa12.83□□□□□ -0.36
FOXN3-204ENST00000553840 SOCS3O14543 225 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 GATA2P23769 480 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-204ENST00000553840 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 RAP2BP61225 183 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 SELENOTP62341 195 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 OR10P1Q8NGE3 313 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 SLC25A32Q9H2D1 315 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 NPVFQ9HCQ7 196 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 MGAT4CQ9UBM8 478 aa12.82□□□□□ -0.36
FOXN3-204ENST00000553840 ELOA3CA0A087WX78 387 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-204ENST00000553840 TSC22D2O75157 780 aa12.81□□□□□ -0.36
FOXN3-204ENST00000553840 TAS2R30P59541 319 aa12.81□□□□□ -0.36
FOXN3-204ENST00000553840 DLK1P80370 383 aa12.81□□□□□ -0.36
FOXN3-204ENST00000553840 GDF5OSQ5U4N7 250 aa12.81□□□□□ -0.36
FOXN3-204ENST00000553840 CYP2G1PQ6ZSU1 146 aa12.81□□□□□ -0.36
FOXN3-204ENST00000553840 NRARPQ7Z6K4 114 aa12.81□□□□□ -0.36
FOXN3-204ENST00000553840 ZBTB8BQ8NAP8 495 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-204ENST00000553840 RSG1Q9BU20 258 aa12.81□□□□□ -0.36
FOXN3-204ENST00000553840 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 SMIM9A6NGZ8 99 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 FNDC10F2Z333 226 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 METTL15P1P0C7V9 234 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 PAX9P55771 341 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 RRAS2P62070 204 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-204ENST00000553840 TMEM14EPQ6UXP3 125 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 TMEM182Q6ZP80 229 aaPredicted RBP12.8□□□□□ -0.36
FOXN3-204ENST00000553840 SEC22CQ9BRL7 303 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 RNF24Q9Y225 148 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 HIGD1AQ9Y241 93 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 DNAH1Q9P2D7 4330 aa12.8□□□□□ -0.36
FOXN3-204ENST00000553840 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 IGLL5B9A064 214 aa12.79□□□□□ -0.36
FOXN3-204ENST00000553840 L7N2F9 121 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1064.5 ms