RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 MRPL57Q9BQC6 102 aaKnown RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 TMEM191AQ9H0A3 160 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 LHX9Q9NQ69 397 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 MARCOQ9UEW3 520 aaPredicted RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 PHLDA3Q9Y5J5 127 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 DICER1Q9UPY3 1922 aaKnown RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 KNDC1Q76NI1 1749 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 MYH11P35749 1972 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 LOXHD1Q8IVV2 1947 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 TET2Q6N021 2002 aaPredicted RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 TRAV13-1A0A0B4J241 112 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 H3BMG7 143 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 SNAPC5O75971 98 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 CGB3P0DN86 165 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 CGB7P0DN87 165 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 CRYGSP22914 178 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 TGFBR1P36897 503 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 SRP14P37108 136 aaKnown RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 FOXA3P55318 350 aaPredicted RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 GNB2P62879 340 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 EIF5AP63241 154 aaKnown RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 MEF2BQ02080 365 aaPredicted RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 MEIG1Q5JSS6 88 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 PHF5AQ7RTV0 110 aaKnown RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 TEX29Q8N6K0 151 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 C15orf56Q8N910 161 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 OPRPNQ99935 248 aaPredicted RBP2.89□□□□□ -1.95
USP44-208ENST00000552440 SNHG12Q9BXW3 62 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 ZNF835Q9Y2P0 537 aa2.89□□□□□ -1.95
USP44-208ENST00000552440 DSPPQ9NZW4 1301 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 PLXNB3Q9ULL4 1909 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 PKD1L3Q7Z443 1732 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 IFT172Q9UG01 1749 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 TUBGCP6Q96RT7 1819 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 CDK5RAP2Q96SN8 1893 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 IGHV3-21A0A0B4J1V1 117 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 BBIP1A8MTZ0 92 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 ZNF727A8MUV8 499 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 A8MWP6 167 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 CXCL1P09341 107 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 CD28P10747 220 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 CRHBPP24387 322 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 AKR1C2P52895 323 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 UBE2BP63146 152 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 HES1Q14469 280 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 FAAP20Q6NZ36 180 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 GTF2H5Q6ZYL4 71 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 AMN1Q8IY45 258 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 C11orf42Q8N5U0 333 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 OR5D14Q8NGL3 314 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 DEDD2Q8WXF8 326 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 SLC25A46Q96AG3 418 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 C16orf74Q96GX8 76 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 BANF2Q9H503 90 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 ZNF586Q9NXT0 402 aa2.88□□□□□ -1.95
USP44-208ENST00000552440 MYH7P12883 1935 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 IGKV1-9A0A0C4DH69 117 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 FAM236AA0A1B0GUQ0 79 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 FAM236BA0A1B0GV22 79 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 ZFP92A6NM28 416 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 K7ERS5 55 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 IGHV4-34P06331 123 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 HBBP68871 147 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 DIAPH2-AS1Q14236 149 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 FAM104BQ5XKR9 115 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 ZNF880Q6PDB4 577 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 SPATA12Q7Z6I5 190 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 C4orf33Q8N1A6 199 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 ZFAND2AQ8N6M9 145 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 CD177Q8N6Q3 437 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 OR8D4Q8NGM9 314 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 OR5H6Q8NGV6 325 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 NAT14Q8WUY8 206 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 ADAT1Q9BUB4 502 aaKnown RBP2.87□□□□□ -1.95
USP44-208ENST00000552440 MRPL32Q9BYC8 188 aaKnown RBP2.87□□□□□ -1.95
USP44-208ENST00000552440 SLC39A9Q9NUM3 307 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 C21orf62Q9NYP8 219 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 CCDC167Q9P0B6 97 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 LY75O60449 1722 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 UBR2Q8IWV8 1755 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 UNC80Q8N2C7 3258 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 CPSF1Q10570 1443 aaKnown RBP2.87□□□□□ -1.95
USP44-208ENST00000552440 PLXND1Q9Y4D7 1925 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 PIK3C2AO00443 1686 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 KIAA1551Q9HCM1 1747 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 ARFGEF1Q9Y6D6 1849 aa2.87□□□□□ -1.95
USP44-208ENST00000552440 TRAV27A0A087WT01 109 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 A8MWV9 139 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 KRASP01116 189 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 HLA-DQA1P01909 254 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 GIG44P09565 113 aaPredicted RBP2.86□□□□□ -1.95
USP44-208ENST00000552440 OR5AC1P0C628 307 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 NPPCP23582 126 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 TSPEAR-AS2P59090 65 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 YPEL3P61236 119 aaPredicted RBP2.86□□□□□ -1.95
USP44-208ENST00000552440 QRFPP83859 136 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 RHOGP84095 191 aa2.86□□□□□ -1.95
USP44-208ENST00000552440 PLGLB1Q02325 96 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms