RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SERF1AO75920 110 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 MT-ND6P03923 174 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 AMY1AP04745 511 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 UQCRFS1P47985 274 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 FAM209BQ5JX69 171 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 TMEM14CQ9P0S9 112 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 S4R3C0 116 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 SVEP1Q4LDE5 3571 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 TCRAP04437 139 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 RAB4BP61018 213 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 NDPQ00604 133 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 Q0VG73 95 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 KIAA1644Q3SXP7 199 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 ITLN2Q8WWU7 325 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 GRAMD2BQ96HH9 432 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 GPR82Q96P67 336 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 MLST8Q9BVC4 326 aa14.62□□□□□ -0.07
PRPF40B-208ENST00000548436 ESDP10768 282 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 SFTPCP11686 197 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 COX19Q49B96 90 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 CCDC144NLQ6NUI1 221 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 Q8N6K4 173 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 FANCD2OSQ96PS1 177 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 SIRPDQ9H106 197 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 PKD1L2Q7Z442 2459 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 NCBP2LA6PVI3 153 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 TOMM40O96008 361 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 HIST1H1EP10412 219 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 ZNF562Q6V9R5 426 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 ZNF664Q8N3J9 261 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 GNB4Q9HAV0 340 aa14.61□□□□□ -0.07
PRPF40B-208ENST00000548436 TSTD3H0UI37 97 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 C19orf84I3L1E1 186 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 MINOS1Q5TGZ0 78 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 LINC00322Q6ZN03 302 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 BAGE3Q86Y29 109 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 ZNF491Q8N8L2 437 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 NUP35Q8NFH5 326 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 ARPC1AQ92747 370 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 SMIM12Q96EX1 92 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 FMC1Q96HJ9 113 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 MS4A10Q96PG2 267 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 MINOS1-NBL1R4GNA1 71 aa14.6□□□□□ -0.07
PRPF40B-208ENST00000548436 IGLV11-55A0A075B6I3 123 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 NPIPB5A8MRT5 1133 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 LTAP01374 205 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 EXOC3-AS1Q8N2X6 119 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 TMEM68Q96MH6 324 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 SHANK2-AS3Q9BTD1 123 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 OTORQ9NRC9 128 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 OOSP1A8MZH6 123 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 H3BRN7 92 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 BMPR1BO00238 502 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 HLA-DQA1P01909 254 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 EFNA4P52798 201 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 EBI3Q14213 229 aa14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 USF2Q15853 346 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-208ENST00000548436 PAX1P15863 534 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 GNLYP22749 145 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 DDTP30046 118 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 IQCJQ1A5X6 159 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 TSKUQ8WUA8 353 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 RNF125Q96EQ8 232 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 C17orf77Q96MU5 243 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 ZNF331Q9NQX6 463 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 AKAP6Q13023 2319 aa14.58□□□□□ -0.08
PRPF40B-208ENST00000548436 IL4P05112 153 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 CD33P20138 364 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 TPPP2P59282 170 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 PAFAH1B2P68402 229 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 DEFA6Q01524 100 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 BCL6BQ8N143 479 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 TTC9CQ8N5M4 171 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 WIPF2Q8TF74 440 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 NEU1Q99519 415 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 CHRDL1Q9BU40 450 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 TRAV8-1A0A0A6YYK1 113 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 IGHV2-70DA0A0C4DH43 119 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 WI2-2373I1.2A0A1W2PRP0 233 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 HIGD1CA8MV81 97 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 VWC2LB2RUY7 222 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 F8W735 103 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 TOX4O94842 621 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 SCGB1D1O95968 90 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 TMEM11P17152 192 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 SLAQ13239 276 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 GDF5OSQ5U4N7 250 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 Q6ZWC4 215 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 USP24Q9UPU5 2620 aa14.57□□□□□ -0.08
PRPF40B-208ENST00000548436 GNG7O60262 68 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 SRIP30626 198 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 BPIFA4PQ86YQ2 179 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 C14orf144Q96I85 54 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 AJUBAQ96IF1 538 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 PRSS22Q9GZN4 317 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 TRBV19A0A075B6N1 114 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 IGLV2-11P01706 119 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 APCSP02743 223 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 IGLC2P0DOY2 106 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 EGR2P11161 476 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms