RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 NFAM1Q8NET5 270 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-203ENST00000547825 ZNF502Q8TBZ5 544 aa4.5□□□□□ -1.69
LIMA1-203ENST00000547825 RNASEH2CQ8TDP1 164 aaKnown RBP4.5□□□□□ -1.69
LIMA1-203ENST00000547825 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
LIMA1-203ENST00000547825 TNFRSF19Q9NS68 423 aa4.5□□□□□ -1.69
LIMA1-203ENST00000547825 IGHV1-45A0A0A0MS14 117 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 A0A1W2PN81 502 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 A1L4Q6 167 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 VWC2LB2RUY7 222 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 SPRY2O43597 315 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 FRMD6-AS1P0C7T7 363 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 PPIFP30405 207 aaKnown RBP4.49□□□□□ -1.69
LIMA1-203ENST00000547825 TIRAPP58753 221 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 HBBP68871 147 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 SLC25A53Q5H9E4 307 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 ZNF766Q5HY98 468 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 RIPPLY2Q5TAB7 128 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 TMEM136Q6ZRR5 245 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 WDR83OSQ9Y284 106 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 YLPM1P49750 1951 aaKnown RBP4.49□□□□□ -1.69
LIMA1-203ENST00000547825 NOTCH2Q04721 2471 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 A0A1W2PS18 150 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 TMEM210A6NLX4 147 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 CCL25O15444 150 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 CEACAM4O75871 244 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 GOSR1O95249 250 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 EDN2P20800 178 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 CRYGSP22914 178 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 PSMB2P49721 201 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 RELQ04864 619 aaPredicted RBP4.49□□□□□ -1.69
LIMA1-203ENST00000547825 ZNF585BQ52M93 769 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 LINC00305Q7Z4B0 112 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 SAXO1Q8IYX7 474 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 DEFB104AQ8WTQ1 72 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 NDFIP1Q9BT67 221 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 GGTLC1Q9BX51 225 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 TTTY12Q9BZ98 90 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 RNF115Q9Y4L5 304 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 TRBV9A0A0B4J1U6 114 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 NBEAP1P0C6P0 100 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 PSG7Q13046 419 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 ATP1A1-AS1Q5TC04 95 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 SAMD13Q5VXD3 122 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 HAPLN4Q86UW8 402 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 OR10W1Q8NGF6 305 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 OR2K2Q8NGT1 345 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 OR10AG1Q8NH19 301 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 ITLN1Q8WWA0 313 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 RCHY1Q96PM5 261 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 HIST1H4GQ99525 98 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 ZNF703Q9H7S9 590 aaPredicted RBP4.49□□□□□ -1.69
LIMA1-203ENST00000547825 CALYQ9NYX4 217 aa4.49□□□□□ -1.69
LIMA1-203ENST00000547825 A0A1W2PRE2 83 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 LIPFP07098 398 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 IGLC2P0DOY2 106 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 IGLC3P0DOY3 106 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 DEFB109BQ30KR1 87 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 C1orf185Q5T7R7 199 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 TMEM14EPQ6UXP3 125 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 ZNF418Q8TF45 676 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 DPF1Q92782 380 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 RASL11BQ9BPW5 248 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 C1QTNF5Q9BXJ0 243 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 CST9LQ9H4G1 147 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 NHP2Q9NX24 153 aaKnown RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 TRAV8-1A0A0A6YYK1 113 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 A0A1B0GWB2 263 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 LINC00473A8K010 186 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 PEX7O00628 323 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 MGST3O14880 152 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 NDUFB3O43676 98 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 IGKV1-39P01597 117 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 IGKV1D-39P04432 117 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 COX6A1P12074 109 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 FOXF2Q12947 444 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 C2orf83Q53S99 150 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 C10orf55Q5SWW7 151 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 LINC00596Q86U02 117 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 TSKUQ8WUA8 353 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 RPEQ96AT9 228 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 SARAFQ96BY9 339 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 BBC3Q96PG8 261 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 C20orf144Q9BQM9 153 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 SETD2Q9BYW2 2564 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 ZNF469Q96JG9 3925 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 MYO9AB2RTY4 2548 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 IZUMO1RA6ND01 250 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 K7ENP7 123 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 STAG3L2P0CL84 134 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 STAG3L3P0CL85 134 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 IGLL1P15814 213 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 FCGR2BP31994 310 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 OCIAD2Q56VL3 154 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 INO80CQ6PI98 192 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 ZCCHC24Q8N2G6 241 aaKnown RBP4.48□□□□□ -1.69
LIMA1-203ENST00000547825 ZNF414Q96IQ9 312 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 GNB1LQ9BYB4 327 aa4.48□□□□□ -1.69
LIMA1-203ENST00000547825 PKIBQ9C010 78 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms