RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 NEU1Q99519 415 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 PAIP2BQ9ULR5 123 aaKnown RBP10.36□□□□□ -0.75
COL2A1-209ENST00000546974 CELA1Q9UNI1 258 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 PRSS46E5RG02 174 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 WRBO00258 174 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 HOXB5P09067 269 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 UBE2MP61081 183 aaKnown RBP10.35□□□□□ -0.75
COL2A1-209ENST00000546974 PRR20EP86478 221 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 PRR20CP86479 221 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 PRR20DP86480 221 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 PRR20BP86481 221 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 PRR20AP86496 221 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 SAMD13Q5VXD3 122 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 SPATA31B1PQ5VZV4 182 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 GGNBP1Q5YKI7 109 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 ZNF705AQ6ZN79 300 aaPredicted RBP10.35□□□□□ -0.75
COL2A1-209ENST00000546974 OR8I2Q8N0Y5 310 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 RNF126Q9BV68 326 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 MAGT1Q9H0U3 335 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 SLC45A2Q9UMX9 530 aa10.35□□□□□ -0.75
COL2A1-209ENST00000546974 IGHV4-4A0A075B6R2 117 aa10.34□□□□□ -0.75
COL2A1-209ENST00000546974 ISLRO14498 428 aa10.34□□□□□ -0.75
COL2A1-209ENST00000546974 DEFB1P60022 68 aa10.34□□□□□ -0.75
COL2A1-209ENST00000546974 COQ8AQ8NI60 647 aa10.34□□□□□ -0.75
COL2A1-209ENST00000546974 DEFB131BA0A096LNP1 70 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 SMIM9A6NGZ8 99 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 ZNF705FA8MVS1 300 aaPredicted RBP10.33□□□□□ -0.76
COL2A1-209ENST00000546974 IGKV3-20P01619 116 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
COL2A1-209ENST00000546974 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
COL2A1-209ENST00000546974 MEOX2P50222 304 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 PAX9P55771 341 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 SPANXN5Q5MJ07 72 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 SPANXN2Q5MJ10 180 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 SRRQ9GZT4 340 aa10.33□□□□□ -0.76
COL2A1-209ENST00000546974 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
COL2A1-209ENST00000546974 C9orf170A2RU37 121 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 NAP1L6A6NFF2 107 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 ZNF98A6NK75 572 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 ZNF701M0R085 212 aaPredicted RBP10.32□□□□□ -0.76
COL2A1-209ENST00000546974 AMBPP02760 352 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 S100A7P31151 101 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 GALR1P47211 349 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 FXYD7P58549 80 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 ID3Q02535 119 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 EBLN2Q6P2I7 272 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 ZNF709Q8N972 641 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 BPIFCQ8NFQ6 507 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 OR4B1Q8NGF8 309 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 OR4D5Q8NGN0 318 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 RPRMQ9NS64 109 aa10.32□□□□□ -0.76
COL2A1-209ENST00000546974 HERC2O95714 4834 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 A0A0J9YX75 114 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 NDUFB6O95139 128 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 SPART-AS1P0CW21 52 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 INPP1P49441 399 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 PSG9Q00887 426 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 ZNF767PQ75MW2 155 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 C16orf92Q96LL3 132 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 GPR82Q96P67 336 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 SLC25A32Q9H2D1 315 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 RFNGQ9Y644 331 aa10.31□□□□□ -0.76
COL2A1-209ENST00000546974 PKHD1P08F94 4074 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 A6NHS1 94 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 H3BP45 60 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 ADAP1O75689 374 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 ORM2P19652 201 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 GATA2P23769 480 aaPredicted RBP10.3□□□□□ -0.76
COL2A1-209ENST00000546974 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
COL2A1-209ENST00000546974 AKR1C1Q04828 323 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 BAK1Q16611 211 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 TRIQKQ629K1 86 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 TMEM182Q6ZP80 229 aaPredicted RBP10.3□□□□□ -0.76
COL2A1-209ENST00000546974 ACOT7LQ6ZUV0 252 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 TMEM144Q7Z5S9 345 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 OR1B1Q8NGR6 318 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 C20orf173Q96LM9 149 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 C17orf77Q96MU5 243 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 RSG1Q9BU20 258 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 TMEM147Q9BVK8 224 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 SLC35B3Q9H1N7 401 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 SLC25A22Q9H936 323 aa10.3□□□□□ -0.76
COL2A1-209ENST00000546974 IGHV3OR16-12A0A075B7B8 117 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 A8MTW9 85 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 F6UB75 175 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 IFNA21P01568 189 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 OR4E1P0C645 316 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 FAM78BQ5VT40 261 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 GSG1LQ6UXU4 331 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 PSENENQ9NZ42 101 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 DOK5Q9P104 306 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 GOLT1BQ9Y3E0 138 aa10.29□□□□□ -0.76
COL2A1-209ENST00000546974 TEX48A0A1B0GUV7 120 aa10.28□□□□□ -0.76
COL2A1-209ENST00000546974 PMS2P5A8MQ11 134 aa10.28□□□□□ -0.76
COL2A1-209ENST00000546974 EMP1P54849 157 aa10.28□□□□□ -0.76
COL2A1-209ENST00000546974 CYP2G1PQ6ZSU1 146 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms