RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 PGPA6NDG6 321 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 A8MWL6 223 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 NUP35Q8NFH5 326 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 NRN1Q9NPD7 142 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 OTORQ9NRC9 128 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 A1L4Q6 167 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 SNRPCP09234 159 aaKnown RBP18.56■□□□□ 0.56
FOXA1-202ENST00000545425 FRMD6-AS1P0C7T7 363 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 MFAP2P55001 183 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 ZNF841Q6ZN19 808 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 RPEQ96AT9 228 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 SH3BGRL2Q9UJC5 107 aa18.56■□□□□ 0.56
FOXA1-202ENST00000545425 TEX22C9J3V5 150 aa18.55■□□□□ 0.56
FOXA1-202ENST00000545425 LTAP01374 205 aa18.55■□□□□ 0.56
FOXA1-202ENST00000545425 COL8A2P25067 703 aa18.55■□□□□ 0.56
FOXA1-202ENST00000545425 HCP5Q6MZN7 132 aa18.55■□□□□ 0.56
FOXA1-202ENST00000545425 RITA1Q96K30 269 aa18.55■□□□□ 0.56
FOXA1-202ENST00000545425 PRSS22Q9GZN4 317 aa18.55■□□□□ 0.56
FOXA1-202ENST00000545425 RPP21Q9H633 154 aaKnown RBP18.55■□□□□ 0.56
FOXA1-202ENST00000545425 ICE1Q9Y2F5 2266 aa18.54■□□□□ 0.56
FOXA1-202ENST00000545425 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.54■□□□□ 0.56
FOXA1-202ENST00000545425 LINC00479Q96M42 142 aa18.54■□□□□ 0.56
FOXA1-202ENST00000545425 SNHG12Q9BXW3 62 aa18.54■□□□□ 0.56
FOXA1-202ENST00000545425 PPIAL4CA0A0B4J2A2 164 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 A0A1B0GXF2 115 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 DIRC3C9JPN6 131 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 LY6LH3BQJ8 138 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 SPINK4O60575 86 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 MOSP00540 346 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 PPIAL4GP0DN37 164 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 OR8B3Q8NGG8 313 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 OR8B2Q96RD0 313 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 FBXL7Q9UJT9 491 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 F2Z2F3 143 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 TCRAP04437 139 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 MMDQ15546 238 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 C18orf32Q8TCD1 76 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 VN1R17PQ8TDU5 208 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 BORCS7Q96B45 105 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 CBLN4Q9NTU7 201 aa18.53■□□□□ 0.56
FOXA1-202ENST00000545425 LY6G5BQ8NDX9 201 aa18.52■□□□□ 0.56
FOXA1-202ENST00000545425 SRSF12Q8WXF0 261 aaKnown RBP18.52■□□□□ 0.56
FOXA1-202ENST00000545425 NEU1Q99519 415 aa18.52■□□□□ 0.56
FOXA1-202ENST00000545425 EREGO14944 169 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 LIPFP07098 398 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 IGLC1P0CG04 106 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 PMCHL1Q16048 86 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 LYPD1Q8N2G4 141 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 MUC15Q8N387 334 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 FAM168AQ92567 244 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 Q9H3A6 140 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 UTP20O75691 2785 aaKnown RBP18.51■□□□□ 0.55
FOXA1-202ENST00000545425 IGHV3-72A0A0B4J1Y9 119 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 TRAV34A0A0B4J273 112 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 C19orf71A6NCJ1 209 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 HIGD1CA8MV81 97 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 CDKN1AP38936 164 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 KRTDAPP60985 99 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 HBBP68871 147 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 SLC35B1P78383 322 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 KIAA1644Q3SXP7 199 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 NHLRC2Q8NBF2 726 aa18.51■□□□□ 0.55
FOXA1-202ENST00000545425 C20orf202A1L168 122 aa18.5■□□□□ 0.55
FOXA1-202ENST00000545425 I3L2K1 104 aa18.5■□□□□ 0.55
FOXA1-202ENST00000545425 P01737 135 aa18.5■□□□□ 0.55
FOXA1-202ENST00000545425 CEACAM3P40198 252 aa18.5■□□□□ 0.55
FOXA1-202ENST00000545425 SLAQ13239 276 aa18.5■□□□□ 0.55
FOXA1-202ENST00000545425 BLNKQ8WV28 456 aa18.5■□□□□ 0.55
FOXA1-202ENST00000545425 ITLN2Q8WWU7 325 aaPredicted RBP18.5■□□□□ 0.55
FOXA1-202ENST00000545425 DAZAP1Q96EP5 407 aaKnown RBP18.5■□□□□ 0.55
FOXA1-202ENST00000545425 RASL11BQ9BPW5 248 aa18.5■□□□□ 0.55
FOXA1-202ENST00000545425 SSBP3Q9BWW4 388 aaPredicted RBP18.5■□□□□ 0.55
FOXA1-202ENST00000545425 KLHDC1Q8N7A1 406 aa18.49■□□□□ 0.55
FOXA1-202ENST00000545425 Q8N976 141 aa18.49■□□□□ 0.55
FOXA1-202ENST00000545425 ALKBH7Q9BT30 221 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-202ENST00000545425 NPIPB6E9PJ23 425 aa18.49■□□□□ 0.55
FOXA1-202ENST00000545425 CA1P00915 261 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-202ENST00000545425 IGHV3-48P01763 117 aa18.49■□□□□ 0.55
FOXA1-202ENST00000545425 GNG5P63218 68 aa18.49■□□□□ 0.55
FOXA1-202ENST00000545425 ZNF705AQ6ZN79 300 aaPredicted RBP18.49■□□□□ 0.55
FOXA1-202ENST00000545425 TRAV30A0A087WSZ9 112 aa18.48■□□□□ 0.55
FOXA1-202ENST00000545425 TCAPO15273 167 aa18.48■□□□□ 0.55
FOXA1-202ENST00000545425 HOXB4P17483 251 aaPredicted RBP18.48■□□□□ 0.55
FOXA1-202ENST00000545425 PMCHP20382 165 aa18.48■□□□□ 0.55
FOXA1-202ENST00000545425 ZNF672Q499Z4 452 aaPredicted RBP18.48■□□□□ 0.55
FOXA1-202ENST00000545425 NIT1Q86X76 327 aa18.48■□□□□ 0.55
FOXA1-202ENST00000545425 OR11H6Q8NGC7 330 aa18.48■□□□□ 0.55
FOXA1-202ENST00000545425 RCHY1Q96PM5 261 aa18.48■□□□□ 0.55
FOXA1-202ENST00000545425 FAM103A1Q9BTL3 118 aaKnown RBP18.48■□□□□ 0.55
FOXA1-202ENST00000545425 M0R1W7 72 aa18.47■□□□□ 0.55
FOXA1-202ENST00000545425 PLAUP00749 431 aa18.47■□□□□ 0.55
FOXA1-202ENST00000545425 ADORA2A-AS1P86434 159 aa18.47■□□□□ 0.55
FOXA1-202ENST00000545425 PRR27Q6MZM9 219 aa18.47■□□□□ 0.55
FOXA1-202ENST00000545425 RBPMS2Q6ZRY4 209 aaKnown RBP18.47■□□□□ 0.55
FOXA1-202ENST00000545425 ZNF48Q96MX3 618 aaPredicted RBP18.47■□□□□ 0.55
FOXA1-202ENST00000545425 SLC25A39Q9BZJ4 359 aaPredicted RBP18.47■□□□□ 0.55
FOXA1-202ENST00000545425 RAB1BQ9H0U4 201 aa18.47■□□□□ 0.55
FOXA1-202ENST00000545425 HSBP1O75506 76 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 PSG1P11464 419 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 CNTFRP26992 372 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms