RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 HOXA3O43365 443 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 SLC25A14O95258 325 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 NPYP01303 97 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 CXCL8P10145 99 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 SUB1P53999 127 aaKnown RBP eCLIP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 ZNF542PQ5EBM4 170 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 IGFL2Q6UWQ7 119 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 ZNF493Q6ZR52 646 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 RPS27LQ71UM5 84 aaKnown RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 ZNF627Q7L945 461 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 LINC00643Q86TS7 51 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 PLXDC1Q8IUK5 500 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 FAM19A2Q8N3H0 131 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 POM121L12Q8N7R1 296 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 IL1F10Q8WWZ1 152 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 IGF2BP2-AS1Q96M15 143 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 DPH3P1Q9H4G8 78 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 ZNF665Q9H7R5 613 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 NXT2Q9NPJ8 142 aaKnown RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 AMMECR1Q9Y4X0 333 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 U3KQE9 123 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 NUP205Q92621 2012 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 TRGV11A0A075B6L2 103 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 TRBV5-5A0A0J9YX44 114 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 UBE2L5PA0A1B0GUS4 154 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 M0QZQ0 153 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 SYNGR2O43760 224 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 NDUFS5O43920 106 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 NGFP01138 241 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 CRYBA2P53672 197 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 APOC4P55056 127 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 ERVK-16P61578 105 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 CDSNQ15517 529 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 C1orf140Q5VVS0 124 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 TSACCQ96A04 125 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 TRGV9Q99603 122 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 CHAC1Q9BUX1 264 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 STARD5Q9NSY2 213 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 NHP2Q9NX24 153 aaKnown RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 ANAPC10Q9UM13 185 aa4.1□□□□□ -1.75
UBE4A-203ENST00000545354 NYNRINQ9P2P1 1898 aaKnown RBP4.1□□□□□ -1.75
UBE4A-203ENST00000545354 CDH23Q9H251 3354 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 PLAC8L1A1L4L8 177 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 SMKR1H3BMG3 65 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 VCYO14598 125 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 GCHFRP30047 84 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 PCBD1P61457 104 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 TRIP6Q15654 476 aaKnown RBP4.09□□□□□ -1.75
UBE4A-203ENST00000545354 KCTD18Q6PI47 426 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-203ENST00000545354 DEFB123Q8N688 67 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 PAXXQ9BUH6 204 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 DYNLRB1Q9NP97 96 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 OSTCQ9NRP0 149 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 KLK13Q9UKR3 277 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 EPDR1Q9UM22 224 aa4.09□□□□□ -1.75
UBE4A-203ENST00000545354 F11RQ9Y624 299 aaKnown RBP4.09□□□□□ -1.75
UBE4A-203ENST00000545354 COL4A1P02462 1669 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 POLR2AP24928 1970 aaKnown RBP4.09□□□□□ -1.76
UBE4A-203ENST00000545354 MYMXA0A1B0GTQ4 84 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 PGPA6NDG6 321 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 K7EM74 188 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 IGKV5-2P06315 115 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 LGALS3P17931 250 aaKnown RBP4.09□□□□□ -1.76
UBE4A-203ENST00000545354 SUPT4H1P63272 117 aaKnown RBP4.09□□□□□ -1.76
UBE4A-203ENST00000545354 LINC01561Q8N1V8 128 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 DCAF4L2Q8NA75 395 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 THAP8Q8NA92 274 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 NEXN-AS1Q8NBZ9 246 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 OR5C1Q8NGR4 320 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 C2orf48Q96LS8 159 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 ODF3Q96PU9 254 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 GFI1Q99684 422 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 LIME1Q9H400 295 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 LINC00527Q9UJ94 153 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 WDR83OSQ9Y284 106 aa4.09□□□□□ -1.76
UBE4A-203ENST00000545354 MYLKQ15746 1914 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 TRBV5-7A0A0A0MS05 114 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 FFAR1O14842 300 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 SCRG1O75711 98 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 TCL1BO95988 128 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 TCRAP04437 139 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 AQP1P29972 269 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 DUTP33316 252 aaKnown RBP4.08□□□□□ -1.76
UBE4A-203ENST00000545354 DSCR4P56555 118 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-203ENST00000545354 ECSCRQ19T08 205 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 FAM219BQ5XKK7 198 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 Q6ZQT7 251 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 ZAR1Q86SH2 424 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 RAB42Q8N4Z0 105 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 TMEM252Q8N6L7 170 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 TMEM230Q96A57 120 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 DCTN5Q9BTE1 182 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 DEFB127Q9H1M4 99 aa4.08□□□□□ -1.76
UBE4A-203ENST00000545354 KIF26AQ9ULI4 1882 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-203ENST00000545354 CRYM-AS1A6NIL9 109 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 C11orf94C9JXX5 98 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 UBE2L6O14933 153 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms