RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 SLC25A21Q9BQT8 299 aaPredicted RBP1.75□□□□□ -2.13
LEMD3-206ENST00000545026 CCDC94Q9BW85 323 aaPredicted RBP1.75□□□□□ -2.13
LEMD3-206ENST00000545026 RASL12Q9NYN1 266 aa1.75□□□□□ -2.13
LEMD3-206ENST00000545026 EXPH5Q8NEV8 1989 aa1.75□□□□□ -2.13
LEMD3-206ENST00000545026 DENND4CQ5VZ89 1909 aa1.75□□□□□ -2.13
LEMD3-206ENST00000545026 TAF1LQ8IZX4 1826 aa1.75□□□□□ -2.13
LEMD3-206ENST00000545026 OBSL1O75147 1896 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 TRBV6-7A0A0A0MS04 114 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 A8MWV9 139 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 ZNF736B4DX44 427 aaPredicted RBP1.74□□□□□ -2.13
LEMD3-206ENST00000545026 M0R2N4 97 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 IFNA1P01562 189 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 LYG2Q86SG7 212 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 Q8N814 137 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 OR10K1Q8NGX5 313 aa1.74□□□□□ -2.13
LEMD3-206ENST00000545026 TNRC6BQ9UPQ9 1833 aaKnown RBP1.74□□□□□ -2.13
LEMD3-206ENST00000545026 CCDC160A6NGH7 325 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 TEX261Q6UWH6 196 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 TMED4Q7Z7H5 227 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 OR2T35Q8NGX2 323 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 TEX37Q96LM6 180 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 GINS3Q9BRX5 216 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 SH3BGRL3Q9H299 93 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 SS18L2Q9UHA2 77 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 PCTPQ9UKL6 214 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 ZFP30Q9Y2G7 519 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 C22orf24Q9Y442 160 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 CHCHD2Q9Y6H1 151 aaPredicted RBP1.73□□□□□ -2.13
LEMD3-206ENST00000545026 U3KQ87 197 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 MYH7BA7E2Y1 1941 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 DLG5Q8TDM6 1919 aa1.73□□□□□ -2.13
LEMD3-206ENST00000545026 H7C1C5 153 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 AIPO00170 330 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 PHBP35232 272 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 DYNLT3P51808 116 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 ROMO1P60602 79 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 LCN6P62502 163 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 AKR1C8PQ5T2L2 129 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 C4orf3Q8WVX3 66 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 GPER1Q99527 375 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 LYRM2Q9NU23 88 aaPredicted RBP1.72□□□□□ -2.13
LEMD3-206ENST00000545026 ADGRB2O60241 1585 aa1.72□□□□□ -2.13
LEMD3-206ENST00000545026 ROS1P08922 2347 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 DUXBA0A1W2PPF3 345 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 INE1O15225 51 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 NFYBP25208 207 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 POU6F1Q14863 301 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 TMEM254Q8TBM7 123 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 LYSMD1Q96S90 227 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 PAIP2Q9BPZ3 127 aaKnown RBP1.71□□□□□ -2.14
LEMD3-206ENST00000545026 MRPL57Q9BQC6 102 aaKnown RBP1.71□□□□□ -2.14
LEMD3-206ENST00000545026 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 SSR3Q9UNL2 185 aa1.71□□□□□ -2.14
LEMD3-206ENST00000545026 EML6Q6ZMW3 1958 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 TCRBV4S1A1TA0A5B7 111 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 TMEM238C9JI98 176 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 PPP1R2P41236 205 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 GNG3P63215 75 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 MYL5Q02045 173 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 PPP1R2P3Q6NXS1 205 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 OR13C6PQ8NH95 151 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 LINC00526Q96FQ7 95 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 NPCDR1Q9BY65 106 aa1.7□□□□□ -2.14
LEMD3-206ENST00000545026 B4DSR2 109 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 CRHP06850 196 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 HLA-EP13747 358 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 INSL3P51460 131 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 SCGB2B2Q4G0G5 96 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 SMIM20Q8N5G0 67 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 PATE1Q8WXA2 126 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 KRTAP4-1Q9BYQ7 146 aa1.69□□□□□ -2.14
LEMD3-206ENST00000545026 SCN8AQ9UQD0 1980 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 RIIAD1A6NNX1 92 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 MFSD11O43934 449 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 EIF5AL1Q6IS14 154 aaKnown RBP1.68□□□□□ -2.14
LEMD3-206ENST00000545026 PATE2Q6UY27 113 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 PRRT1Q99946 306 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 HOPXQ9BPY8 73 aaPredicted RBP1.68□□□□□ -2.14
LEMD3-206ENST00000545026 OR2J1Q9GZK6 312 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 PBOV1Q9GZY1 135 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 CEP192Q8TEP8 1941 aa1.68□□□□□ -2.14
LEMD3-206ENST00000545026 ARHGEF11O15085 1522 aa1.67□□□□□ -2.14
LEMD3-206ENST00000545026 TAS2R41P59536 307 aa1.67□□□□□ -2.14
LEMD3-206ENST00000545026 SNCBQ16143 134 aa1.67□□□□□ -2.14
LEMD3-206ENST00000545026 MPV17LQ2QL34 196 aa1.67□□□□□ -2.14
LEMD3-206ENST00000545026 ST6GALNAC3Q8NDV1 305 aa1.67□□□□□ -2.14
LEMD3-206ENST00000545026 PBDC1Q9BVG4 233 aa1.67□□□□□ -2.14
LEMD3-206ENST00000545026 LY96Q9Y6Y9 160 aa1.67□□□□□ -2.14
LEMD3-206ENST00000545026 UHRF1BP1Q6BDS2 1440 aa1.66□□□□□ -2.14
LEMD3-206ENST00000545026 CCL16O15467 120 aa1.66□□□□□ -2.14
LEMD3-206ENST00000545026 GDF5OSQ5U4N7 250 aa1.66□□□□□ -2.14
LEMD3-206ENST00000545026 GPX7Q96SL4 187 aaPredicted RBP1.66□□□□□ -2.14
LEMD3-206ENST00000545026 POPDC3Q9HBV1 291 aa1.66□□□□□ -2.14
LEMD3-206ENST00000545026 NCOA6Q14686 2063 aaPredicted RBP1.65□□□□□ -2.14
LEMD3-206ENST00000545026 CEP164Q9UPV0 1460 aa1.65□□□□□ -2.15
LEMD3-206ENST00000545026 TRGC2P03986 189 aa1.65□□□□□ -2.15
LEMD3-206ENST00000545026 DSCR4P56555 118 aaPredicted RBP1.65□□□□□ -2.15
LEMD3-206ENST00000545026 DEFB115Q30KQ5 88 aa1.65□□□□□ -2.15
LEMD3-206ENST00000545026 OR5D14Q8NGL3 314 aa1.65□□□□□ -2.15
LEMD3-206ENST00000545026 IL20Q9NYY1 176 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms