RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 LSM4Q9Y4Z0 139 aaKnown RBP7□□□□□ -1.29
ABCB1-210ENST00000543898 MMP23AO75900 390 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 FABP2P12104 132 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 PRR20EP86478 221 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 PRR20CP86479 221 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 PRR20DP86480 221 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 PRR20BP86481 221 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 PRR20AP86496 221 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 HIST1H1AQ02539 215 aaPredicted RBP6.99□□□□□ -1.29
ABCB1-210ENST00000543898 PRB3Q04118 309 aaPredicted RBP6.99□□□□□ -1.29
ABCB1-210ENST00000543898 HES1Q14469 280 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 TMEM97Q5BJF2 176 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 CIARTQ8N365 385 aaPredicted RBP6.99□□□□□ -1.29
ABCB1-210ENST00000543898 A1L4Q6 167 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 GAGE5Q13069 117 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 GAGE6Q13070 117 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 CCDC144NLQ6NUI1 221 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 FAM71F2Q6NXP2 309 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 PRR7Q8TB68 274 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 Q8TCH9 128 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 HIGD1AQ9Y241 93 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 NDUFB3O43676 98 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 P0C879 139 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 APOBEC3AP31941 199 aaPredicted RBP6.99□□□□□ -1.29
ABCB1-210ENST00000543898 LYRM7Q5U5X0 104 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 MORN5Q5VZ52 161 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 Q9H3A6 140 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 DYSFO75923 2080 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 LAMA1P25391 3075 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 ACACAQ13085 2346 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 C15orf65H3BRN8 121 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 NTN3O00634 580 aaPredicted RBP6.99□□□□□ -1.29
ABCB1-210ENST00000543898 CCL3L1P16619 93 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 NEUROG1Q92886 237 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 RASL11BQ9BPW5 248 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 SPCS1Q9Y6A9 102 aa6.99□□□□□ -1.29
ABCB1-210ENST00000543898 CTRLP40313 264 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 BVES-AS1Q5T3Y7 98 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 TANC2Q9HCD6 1990 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 PROP1O75360 226 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 COX7A1P24310 79 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 ACP1P24666 158 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 GUSBP1Q15486 140 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 ZNF329Q86UD4 541 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 ZCCHC24Q8N2G6 241 aaKnown RBP6.98□□□□□ -1.29
ABCB1-210ENST00000543898 FAM169BQ8N8A8 192 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 RAB1BQ9H0U4 201 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 AAMDCQ9H7C9 122 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 TMEM14BQ9NUH8 114 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 IGHV1-24A0A0C4DH33 117 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 FAM231BA6NCW3 169 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 SRRM5B3KS81 715 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 C21orf140B9A014 251 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 OR2J3O76001 311 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 CKS2P33552 79 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 DUX4L9Q6RFH8 374 aaPredicted RBP6.98□□□□□ -1.29
ABCB1-210ENST00000543898 C11orf53Q8IXP5 236 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 OR4C13Q8NGP0 309 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
ABCB1-210ENST00000543898 CHCHD1Q96BP2 118 aaKnown RBP6.98□□□□□ -1.29
ABCB1-210ENST00000543898 C9orf172C9J069 976 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 M0QXV9 152 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 RNASE2P10153 161 aaKnown RBP6.97□□□□□ -1.29
ABCB1-210ENST00000543898 RPL27AP46776 148 aaKnown RBP6.97□□□□□ -1.29
ABCB1-210ENST00000543898 RASL11AQ6T310 242 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 C1orf43Q9BWL3 253 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 S4R3C0 116 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 TCRBV4S1A1TA0A5B7 111 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 CD5LO43866 347 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 TNFRSF1AP19438 455 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 CACNG7P62955 275 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 SRSF6Q13247 344 aaKnown RBP6.97□□□□□ -1.29
ABCB1-210ENST00000543898 DEFB109BQ30KR1 87 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 C2orf83Q53S99 150 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 ZNF714Q96N38 554 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 TNFRSF6BO95407 300 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 ORM1P02763 201 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 TWIST1Q15672 202 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 ATP5L2Q7Z4Y8 100 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 C9orf106Q8NAJ2 232 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 ZNF414Q96IQ9 312 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 JKAMPQ9P055 326 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 SRRM4A7MD48 611 aaKnown RBP6.97□□□□□ -1.29
ABCB1-210ENST00000543898 SSBP2P81877 361 aaPredicted RBP6.97□□□□□ -1.29
ABCB1-210ENST00000543898 OSR1Q8TAX0 266 aaPredicted RBP6.97□□□□□ -1.29
ABCB1-210ENST00000543898 SLC25A2Q9BXI2 301 aa6.97□□□□□ -1.29
ABCB1-210ENST00000543898 NKX2-8O15522 239 aa6.96□□□□□ -1.29
ABCB1-210ENST00000543898 TEX29Q8N6K0 151 aa6.96□□□□□ -1.29
ABCB1-210ENST00000543898 Q8N7P7 452 aa6.96□□□□□ -1.29
ABCB1-210ENST00000543898 TEX45Q8NA69 505 aa6.96□□□□□ -1.29
ABCB1-210ENST00000543898 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.96□□□□□ -1.29
ABCB1-210ENST00000543898 ZNF257Q9Y2Q1 563 aa6.96□□□□□ -1.29
ABCB1-210ENST00000543898 PPIAL4EA0A075B759 164 aa6.96□□□□□ -1.3
ABCB1-210ENST00000543898 PPIAL4FP0DN26 164 aa6.96□□□□□ -1.3
ABCB1-210ENST00000543898 UTF1Q5T230 341 aa6.96□□□□□ -1.3
ABCB1-210ENST00000543898 NAV3Q8IVL0 2385 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms