RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SEC11BP0C7V7 166 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 SPP1P10451 314 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 CD33P20138 364 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 PLP1P60201 277 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 USF2Q15853 346 aaPredicted RBP9.1□□□□□ -0.95
DDB1-223ENST00000543658 KRTAP21-3Q3LHN1 58 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 UNQ9165/PRO28630Q6UXU0 137 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 OR9G4Q8NGQ1 327 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 DYNLRB2Q8TF09 96 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 RNF2Q99496 336 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 ARV1Q9H2C2 271 aa9.1□□□□□ -0.95
DDB1-223ENST00000543658 A0A1W2PPV4 95 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 K7EMT4 169 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 M6PRP20645 277 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 TMEM41BQ5BJD5 291 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 OR10G4Q8NGN3 311 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 OR10G9Q8NGN4 311 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 OR10G7Q8NGN6 311 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 GATAD1Q8WUU5 269 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 MARC2Q969Z3 335 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 MRPL32Q9BYC8 188 aaKnown RBP9.09□□□□□ -0.95
DDB1-223ENST00000543658 DNAJC4Q9NNZ3 241 aa9.09□□□□□ -0.95
DDB1-223ENST00000543658 SAP30O75446 220 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 TAS2R45P59539 299 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 RHOBP62745 196 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 TM4SF20Q53R12 229 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 FAM78BQ5VT40 261 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 FAM122CQ6P4D5 195 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 LINC00305Q7Z4B0 112 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 LINC00482Q8N8I6 264 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 TMED6Q8WW62 240 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 MCRIP2Q9BUT9 160 aaKnown RBP9.08□□□□□ -0.96
DDB1-223ENST00000543658 SLC25A39Q9BZJ4 359 aaPredicted RBP9.08□□□□□ -0.96
DDB1-223ENST00000543658 SLC25A22Q9H936 323 aa9.08□□□□□ -0.96
DDB1-223ENST00000543658 MRPL27Q9P0M9 148 aaKnown RBP9.08□□□□□ -0.96
DDB1-223ENST00000543658 FBN1P35555 2871 aaKnown RBP9.07□□□□□ -0.96
DDB1-223ENST00000543658 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 IGHV7-4-1A0A0J9YVY3 117 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 C2orf70A6NJV1 201 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 UMAD1C9J7I0 102 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 H3BRN7 92 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 CRYBB3P26998 211 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
DDB1-223ENST00000543658 RAB2AP61019 212 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 UHRF2Q96PU4 802 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 ACTR3CQ9C0K3 210 aaPredicted RBP9.07□□□□□ -0.96
DDB1-223ENST00000543658 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
DDB1-223ENST00000543658 TMEM213A2RRL7 107 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 SEC14L6B5MCN3 397 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 FOLR2P14207 255 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 RAB5CP51148 216 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 KHDC3LQ587J8 217 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 ALKAL2Q6UX46 152 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 OR8I2Q8N0Y5 310 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 SPATA3Q8NHX4 192 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 GPR82Q96P67 336 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 GPR61Q9BZJ8 451 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 VSIRQ9H7M9 311 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 FUT9Q9Y231 359 aa9.06□□□□□ -0.96
DDB1-223ENST00000543658 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 IGHV3-66A0A0C4DH42 116 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 ZNF98A6NK75 572 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 IFNA7P01567 189 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 CBLN1P23435 193 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 RPL11P62913 178 aaKnown RBP9.05□□□□□ -0.96
DDB1-223ENST00000543658 GCSAMLQ5JQS6 135 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 C1orf194Q5T5A4 169 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 C9orf66Q5T8R8 295 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 PATE2Q6UY27 113 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 DPPA3Q6W0C5 159 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 FAM213BQ8TBF2 198 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 TMEM37Q8WXS4 190 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 ZNF414Q96IQ9 312 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 SCRT1Q9BWW7 348 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 TECRQ9NZ01 308 aaKnown RBP9.05□□□□□ -0.96
DDB1-223ENST00000543658 SMPXQ9UHP9 88 aa9.05□□□□□ -0.96
DDB1-223ENST00000543658 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 HELTA6NFD8 242 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 CHEK1O14757 476 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 OR7C2O60412 319 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 CD5P06127 495 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 CSN3P07498 182 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 RPL7P18124 248 aaKnown RBP9.04□□□□□ -0.96
DDB1-223ENST00000543658 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
DDB1-223ENST00000543658 GALR1P47211 349 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 SULT1A2P50226 295 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 BPIFA4PQ86YQ2 179 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 STXBP6Q8NFX7 210 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 RNF141Q8WVD5 230 aa9.04□□□□□ -0.96
DDB1-223ENST00000543658 COL6A5A8TX70 2615 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 BUB3O43684 328 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
DDB1-223ENST00000543658 EDN2P20800 178 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms