RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PRB4P10163 310 aaPredicted RBP15.88■□□□□ 0.13
SUDS3-204ENST00000543473 CST9LQ9H4G1 147 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 C17orf100A8MU93 164 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 OCIAD2Q56VL3 154 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 EXOC3-AS1Q8N2X6 119 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 TDGF1P13385 188 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 SPACA3Q8IXA5 215 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 ASCL2Q99929 193 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 MBNL3Q9NUK0 354 aaKnown RBP15.88■□□□□ 0.13
SUDS3-204ENST00000543473 HOXA3O43365 443 aaPredicted RBP15.88■□□□□ 0.13
SUDS3-204ENST00000543473 PPIFP30405 207 aaKnown RBP15.88■□□□□ 0.13
SUDS3-204ENST00000543473 RPRMLQ8N4K4 120 aa15.88■□□□□ 0.13
SUDS3-204ENST00000543473 EVI2AP22794 236 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 ZNF114Q8NC26 417 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 SPRR3Q9UBC9 169 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 ETV2O00321 342 aaPredicted RBP15.87■□□□□ 0.13
SUDS3-204ENST00000543473 SCGB1A1P11684 91 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 KIR3DS1Q14943 382 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 GOLGB1Q14789 3259 aaKnown RBP15.87■□□□□ 0.13
SUDS3-204ENST00000543473 PKDREJQ9NTG1 2253 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 TRAV8-2A0A0B4J237 113 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 NDUFS8O00217 210 aa15.87■□□□□ 0.13
SUDS3-204ENST00000543473 GEMIN7Q9H840 131 aaKnown RBP15.86■□□□□ 0.13
SUDS3-204ENST00000543473 PCNX1Q96RV3 2341 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 B9A039 149 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 SRSF1Q07955 248 aaKnown RBP eCLIP15.86■□□□□ 0.13
SUDS3-204ENST00000543473 IGHV1-18A0A0C4DH31 117 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 PMS2P5A8MQ11 134 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 ESDP10768 282 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 NPIPB5A8MRT5 1133 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 GTSF1LQ9H1H1 148 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 PLA2G2EQ9NZK7 142 aa15.86■□□□□ 0.13
SUDS3-204ENST00000543473 NCR2O95944 276 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 B3GALT5-AS1P59052 145 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 MLANAQ16655 118 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 HAPLN4Q86UW8 402 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 ARPC1AQ92747 370 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 FXYD7P58549 80 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 GTSCR1Q86UQ5 136 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 MUC6Q6W4X9 2439 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 TRAV8-1A0A0A6YYK1 113 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 COLCA1Q6ZS62 124 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 SMPXQ9UHP9 88 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 TSPAN13O95857 204 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 PRB3Q04118 309 aaPredicted RBP15.85■□□□□ 0.13
SUDS3-204ENST00000543473 C19orf54Q5BKX5 351 aa15.85■□□□□ 0.13
SUDS3-204ENST00000543473 ZNF407Q9C0G0 2248 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 RSPO1Q2MKA7 263 aaPredicted RBP15.84■□□□□ 0.13
SUDS3-204ENST00000543473 CLEC2AQ6UVW9 174 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 ZCCHC24Q8N2G6 241 aaKnown RBP15.84■□□□□ 0.13
SUDS3-204ENST00000543473 TMEM133Q9H2Q1 129 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 TEX43Q6ZNM6 134 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 SCRT1Q9BWW7 348 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 COA6Q5JTJ3 125 aaKnown RBP15.84■□□□□ 0.13
SUDS3-204ENST00000543473 FAM71F2Q6NXP2 309 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 TEX29Q8N6K0 151 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 ITGB1BP1O14713 200 aa15.84■□□□□ 0.13
SUDS3-204ENST00000543473 SRSF6Q13247 344 aaKnown RBP15.84■□□□□ 0.13
SUDS3-204ENST00000543473 LYZL1Q6UWQ5 148 aa15.83■□□□□ 0.13
SUDS3-204ENST00000543473 JMJD8Q96S16 334 aa15.83■□□□□ 0.13
SUDS3-204ENST00000543473 SLC25A2Q9BXI2 301 aa15.83■□□□□ 0.13
SUDS3-204ENST00000543473 HEATR1Q9H583 2144 aaKnown RBP15.83■□□□□ 0.12
SUDS3-204ENST00000543473 FNDC10F2Z333 226 aa15.83■□□□□ 0.12
SUDS3-204ENST00000543473 APOBEC3AP31941 199 aaPredicted RBP15.83■□□□□ 0.12
SUDS3-204ENST00000543473 STPG4Q8N801 248 aa15.83■□□□□ 0.12
SUDS3-204ENST00000543473 MEIG1Q5JSS6 88 aa15.83■□□□□ 0.12
SUDS3-204ENST00000543473 C10orf126Q8N4M7 172 aa15.83■□□□□ 0.12
SUDS3-204ENST00000543473 ANAPC13Q9BS18 74 aa15.83■□□□□ 0.12
SUDS3-204ENST00000543473 NBR2O15453 112 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 COX6B1P14854 86 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 BSPH1Q075Z2 132 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 FAM106AQ4KMX7 169 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 SLC25A39Q9BZJ4 359 aaPredicted RBP15.82■□□□□ 0.12
SUDS3-204ENST00000543473 V9GYV3 84 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 ZNF815PA8K554 130 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 UNQ6494/PRO21346Q6UXR6 183 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 LY6G6EA0A0G2JKS1 128 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 A0A1B0GWJ7 208 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 PCNX2A6NKB5 2137 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 IGLL1P15814 213 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 KIR3DL3Q8N743 410 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 U3KQA8 63 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 TRGV9Q99603 122 aa15.82■□□□□ 0.12
SUDS3-204ENST00000543473 F2Z2F3 143 aa15.81■□□□□ 0.12
SUDS3-204ENST00000543473 ZNF329Q86UD4 541 aa15.81■□□□□ 0.12
SUDS3-204ENST00000543473 TMEM167AQ8TBQ9 72 aa15.81■□□□□ 0.12
SUDS3-204ENST00000543473 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.81■□□□□ 0.12
SUDS3-204ENST00000543473 RNASE2P10153 161 aaKnown RBP15.81■□□□□ 0.12
SUDS3-204ENST00000543473 LINC01559Q495D7 138 aa15.81■□□□□ 0.12
SUDS3-204ENST00000543473 COPS9Q8WXC6 57 aa15.81■□□□□ 0.12
SUDS3-204ENST00000543473 TMEM262E9PQX1 116 aa15.81■□□□□ 0.12
SUDS3-204ENST00000543473 DYNLRB2Q8TF09 96 aa15.81■□□□□ 0.12
SUDS3-204ENST00000543473 CEACAM4O75871 244 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 IGKV3-20P01619 116 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 ORMDL2Q53FV1 153 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 HELZP42694 1942 aaKnown RBP15.8■□□□□ 0.12
SUDS3-204ENST00000543473 A8MWV9 139 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 PAX2Q02962 417 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 MRAP2Q96G30 205 aa15.8■□□□□ 0.12
SUDS3-204ENST00000543473 CHTOPQ9Y3Y2 248 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms