RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 C1orf134Q5TEV5 83 aa10.89□□□□□ -0.67
CLSTN3-213ENST00000541953 IGFL4Q6B9Z1 124 aa10.89□□□□□ -0.67
CLSTN3-213ENST00000541953 TMEM182Q6ZP80 229 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-213ENST00000541953 SLC25A32Q9H2D1 315 aa10.89□□□□□ -0.67
CLSTN3-213ENST00000541953 HERC1Q15751 4861 aa10.89□□□□□ -0.67
CLSTN3-213ENST00000541953 A8MTW9 85 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 DISC1C4P0D8 188 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 CRXO43186 299 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 HBE1P02100 147 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 AKAIN1P0CW23 69 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 SMCO1Q147U7 214 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 SPCS2Q15005 226 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 IL22RA2Q969J5 263 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 C7orf50Q9BRJ6 194 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 GOLT1BQ9Y3E0 138 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 U3KQ87 197 aa10.88□□□□□ -0.67
CLSTN3-213ENST00000541953 PLAC8L1A1L4L8 177 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 ZNF705GA8MUZ8 300 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 M0R2Z0 102 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 ISLRO14498 428 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 RGS5O15539 181 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 IAPPP10997 89 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 GATA2P23769 480 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 ID1P41134 155 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 CCR6P51684 374 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 DAD1P61803 113 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 SSBP1Q04837 148 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 RRN3P1Q2M238 152 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 CLVS1Q8IUQ0 354 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 SLC35E1Q96K37 410 aa10.87□□□□□ -0.67
CLSTN3-213ENST00000541953 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 A0A0B4J2A0 478 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 ANKRD20A5PA0PJZ0 165 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 AKR1C4P17516 323 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 GPX4P36969 197 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 NUP62P37198 522 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 FCN2Q15485 313 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 NOXA1Q86UR1 476 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 BAP18Q8IXM2 172 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 OR8I2Q8N0Y5 310 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 DOK5Q9P104 306 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 SHPKQ9UHJ6 478 aa10.86□□□□□ -0.67
CLSTN3-213ENST00000541953 TEX48A0A1B0GUV7 120 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 PRSS46E5RG02 174 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 PITX3O75364 302 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 AZU1P20160 251 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 MRPS10P82664 201 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 EBLN2Q6P2I7 272 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 RNF182Q8N6D2 247 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 OR11H7Q8NGC8 314 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 ZNRF2Q8NHG8 242 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 PPP1R14BQ96C90 147 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 IGF2BP2-AS1Q96M15 143 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 TRGV9Q99603 122 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 PRRT1Q99946 306 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 MAGT1Q9H0U3 335 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 SLC25A22Q9H936 323 aa10.85□□□□□ -0.67
CLSTN3-213ENST00000541953 SNRPGP15A8MWD9 76 aa10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 C16orf90A8MZG2 172 aa10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 CNN1P51911 297 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 IL18Q14116 193 aa10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 OR1S1Q8NH92 325 aa10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 RSG1Q9BU20 258 aa10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 RPRMQ9NS64 109 aa10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 FAT1Q14517 4588 aa10.84□□□□□ -0.67
CLSTN3-213ENST00000541953 TRAV12-2A0A075B6T6 113 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 ZNF98A6NK75 572 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 CTDSPLO15194 276 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 DEFB130BP0DP73 79 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 DEFB130AP0DP74 79 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 SOHLH1Q5JUK2 328 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 SPATA31B1PQ5VZV4 182 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 TMEM208Q9BTX3 173 aa10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 SLC25A39Q9BZJ4 359 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-213ENST00000541953 NBDYA0A0U1RRE5 68 aa10.82□□□□□ -0.68
CLSTN3-213ENST00000541953 DIRAS2Q96HU8 199 aa10.82□□□□□ -0.68
CLSTN3-213ENST00000541953 KRTAP1-5Q9BYS1 174 aa10.82□□□□□ -0.68
CLSTN3-213ENST00000541953 MCUBQ9NWR8 336 aa10.82□□□□□ -0.68
CLSTN3-213ENST00000541953 PAIP2BQ9ULR5 123 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-213ENST00000541953 KCNIP3Q9Y2W7 256 aa10.82□□□□□ -0.68
CLSTN3-213ENST00000541953 TMED3Q9Y3Q3 217 aa10.82□□□□□ -0.68
CLSTN3-213ENST00000541953 MAPKAPK5-AS1Q8N8E1 139 aa10.81□□□□□ -0.68
CLSTN3-213ENST00000541953 C15orf53Q8NAA6 179 aa10.81□□□□□ -0.68
CLSTN3-213ENST00000541953 PFDN2Q9UHV9 154 aa10.81□□□□□ -0.68
CLSTN3-213ENST00000541953 LINC00588Q9Y4M8 146 aa10.81□□□□□ -0.68
CLSTN3-213ENST00000541953 H3BP45 60 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 CDK2AP2O75956 126 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 NUDT3O95989 172 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 INSP01308 110 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 ORM2P19652 201 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 GALR1P47211 349 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 ALDH3B2P48448 385 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 C6orf223Q8N319 242 aa10.8□□□□□ -0.68
CLSTN3-213ENST00000541953 RNF141Q8WVD5 230 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms