RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF880Q6PDB4 577 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 MORN3Q6PF18 240 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 CASP12Q6UXS9 341 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 WFDC11Q8NEX6 87 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 OR13C8Q8NGS7 320 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 OR2T4Q8NH00 348 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF431Q8TF32 576 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 MRPS24Q96EL2 167 aaKnown RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 ERMAPQ96PL5 475 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 SMR3AQ99954 134 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 ABCG5Q9H222 651 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 TUBA4BQ9H853 241 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 SMCO4Q9NRQ5 59 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 CA10Q9NS85 328 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 SLC23A2Q9UGH3 650 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 SLC35A3Q9Y2D2 325 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 CARHSP1Q9Y2V2 147 aaKnown RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 TLN2Q9Y4G6 2542 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 SCN3AQ9NY46 2000 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 TRAV30A0A087WSZ9 112 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 A0A087WUJ7 227 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 IGHV2-26A0A0B4J1V2 119 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 A0A0J9YY10 115 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 IGSF23A1L1A6 192 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 K7ERS5 55 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 M0R233 179 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 GPR31O00270 319 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 UBFD1O14562 309 aaKnown RBP2.63□□□□□ -1.99
SNHG1-217ENST00000541578 STK16O75716 305 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 S1PR2O95136 353 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 NMBP08949 121 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 CD79AP11912 226 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF14P17017 642 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-217ENST00000541578 MYL12AP19105 171 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 MPV17P39210 176 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 SULT1A2P50226 295 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 PIGPP57054 158 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 TAS2R41P59536 307 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 SNRPD2P62316 118 aaKnown RBP2.63□□□□□ -1.99
SNHG1-217ENST00000541578 CDK6Q00534 326 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 PAFAH1B3Q15102 231 aaKnown RBP2.63□□□□□ -1.99
SNHG1-217ENST00000541578 TBC1D28Q2M2D7 210 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 MESTQ5EB52 335 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 C10orf91Q5T1B1 145 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 FAM222AQ5U5X8 452 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 TMPPEQ6ZT21 453 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF695Q8IW36 515 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 H1FOOQ8IZA3 346 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-217ENST00000541578 OR6V1Q8N148 313 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 LINC00337Q8N6G1 96 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 OR52E4Q8NGH9 312 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 MCFD2Q8NI22 146 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 GNPDA2Q8TDQ7 276 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 TNFAIP8L1Q8WVP5 186 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 PSMF1Q92530 271 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 RNASE6Q93091 150 aaKnown RBP2.63□□□□□ -1.99
SNHG1-217ENST00000541578 REEP6Q96HR9 211 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 PYURFQ96I23 114 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 S100A13Q99584 98 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 GINS4Q9BRT9 223 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 EBPLQ9BY08 206 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 MS4A8Q9BY19 250 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 OR51E2Q9H255 320 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 TXNIPQ9H3M7 391 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 CST9LQ9H4G1 147 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 RBM12B-AS1Q9P1G2 102 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 JPT1Q9UK76 154 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 NINQ8N4C6 2090 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 ABCA1O95477 2261 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 ZANQ9Y493 2812 aa2.63□□□□□ -1.99
SNHG1-217ENST00000541578 TGP01266 2768 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 IGKV2-28A0A075B6P5 120 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 IGHV1-45A0A0A0MS14 117 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 TMEM269A0A1B0GVZ9 245 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 COLCA2A8K830 154 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 CORTO00230 105 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 FFAR1O14842 300 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 CCL25O15444 150 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 CNIH1O95406 144 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 CA2P00918 260 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 IGKV1-39P01597 117 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 IGKV2D-28P01615 120 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 IGKV1D-39P04432 117 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 CST2P09228 141 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 OR5AC1P0C628 307 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 AGTR1P30556 359 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 BRS3P32247 399 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 NCS1P62166 190 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 CAV1Q03135 178 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF816Q0VGE8 651 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-217ENST00000541578 FUT5Q11128 374 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 IHHQ14623 411 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 JOSD1Q15040 202 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-217ENST00000541578 HLA-DRB5Q30154 266 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 ARHGAP11BQ3KRB8 267 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 MORN2Q502X0 79 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 TMEM69Q5SWH9 247 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 FAM78BQ5VT40 261 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 RPS19BP1Q86WX3 136 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms