RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 FAM106CPP0CH98 169 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 FAM106AQ4KMX7 169 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 RBPMS2Q6ZRY4 209 aaKnown RBP11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 DAZAP1Q96EP5 407 aaKnown RBP11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 LINC00574Q9H8X3 128 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 COL8A1P27658 744 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 PRNTQ86SH4 94 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 OR10X1Q8NGY0 326 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 PERPQ96FX8 193 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 MAP1LC3CQ9BXW4 147 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 IGLV3-9A0A075B6K5 115 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 HSBP1L1C9JCN9 74 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 GP9P14770 177 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 MRGPRG-AS1Q2M3A8 158 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 TMEM167AQ8TBQ9 72 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 SARAFQ96BY9 339 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 TPRP12270 2363 aaKnown RBP11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 CNTFRP26992 372 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 GATA4P43694 442 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 FXYD7P58549 80 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 ARL6IP6Q8N6S5 226 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 OR4C13Q8NGP0 309 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 H1FXQ92522 213 aaKnown RBP11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 SVEP1Q4LDE5 3571 aa11.13□□□□□ -0.63
SCNN1A-215ENST00000540037 PCNX1Q96RV3 2341 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 OVOL3O00110 214 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 ENSAO43768 121 aaKnown RBP11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 ARMS2P0C7Q2 107 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 UQCRFS1P47985 274 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 GOLT1AQ6ZVE7 132 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 NEU4Q8WWR8 484 aaPredicted RBP11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 LINC00312Q9Y6C7 94 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 APOHP02749 345 aaPredicted RBP11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 ZNF883P0CG24 379 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 HTR1DP28221 377 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 C1RLQ9NZP8 487 aa11.12□□□□□ -0.63
SCNN1A-215ENST00000540037 PPIAL4DF5H284 164 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 TM4SF5O14894 197 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 LIPFP07098 398 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 ARF6P62330 175 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 LOXL1Q08397 574 aaPredicted RBP11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 FAM27E3Q08E93 113 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 FMC1Q96HJ9 113 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 NDFIP1Q9BT67 221 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 GAGE12BA1L429 117 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 LYPD2Q6UXB3 125 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 C12orf54Q6X4T0 127 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 Q86TA4 180 aa11.11□□□□□ -0.63
SCNN1A-215ENST00000540037 EP300Q09472 2414 aaPredicted RBP11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 POLEQ07864 2286 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 SAP30O75446 220 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 IGLV2-11P01706 119 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 GPR183P32249 361 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 CNOT1A5YKK6 2376 aaKnown RBP11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 PPBPP02775 128 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 OR5AL1P0C617 328 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 LYZP61626 148 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 TIMM23BQ5SRD1 257 aa11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 SRSF12Q8WXF0 261 aaKnown RBP11.1□□□□□ -0.63
SCNN1A-215ENST00000540037 HLA-DRB1P01911 266 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 CT83Q5H943 113 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 C7orf71A4D174 169 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 FAM162BQ5T6X4 162 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 ZADH2Q8N4Q0 377 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 STXBP6Q8NFX7 210 aa11.09□□□□□ -0.63
SCNN1A-215ENST00000540037 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 NPIPB6E9PJ23 425 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 CD5LO43866 347 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 FAM169BQ8N8A8 192 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 CRYGCP07315 174 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 TNFRSF1AP19438 455 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 TEX36Q5VZQ5 186 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 SVIPQ8NHG7 77 aa11.08□□□□□ -0.64
SCNN1A-215ENST00000540037 VSTM2AQ8TAG5 236 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms