RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TM2D3Q9BRN9 247 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 VSIRQ9H7M9 311 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 EDA2RQ9HAV5 297 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 NAGKQ9UJ70 344 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 LINC00527Q9UJ94 153 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 RFNGQ9Y644 331 aa4.64□□□□□ -1.67
CPSF7-219ENST00000539952 TRAV24A0A0B4J272 114 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 A0A0G2JRQ6 117 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 UBE2L5PA0A1B0GUS4 154 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 TMEM30CPA0ZSE6 113 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 A8MZ25 164 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 H3BP45 60 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 TNFSF12O43508 249 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 IGKV1-39P01597 117 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 IGKV1D-39P04432 117 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 TMEM11P17152 192 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 GZMHP20718 246 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 OPRK1P41145 380 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 KIR2DS2P43631 304 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 GPR12P47775 334 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 ARL16Q0P5N6 197 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 Q0VG73 95 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 RAB31Q13636 194 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 EBI3Q14213 229 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 HES1Q14469 280 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 EDDM3AQ14507 147 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 KIR3DS1Q14943 382 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 OR8G2PQ6IF36 304 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 TCF23Q7RTU1 214 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 H2BFWTQ7Z2G1 175 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 TMEM144Q7Z5S9 345 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 TGIF2LXQ8IUE1 241 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 C5orf56Q8N8D9 126 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 OR10G8Q8NGN5 311 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 OR1N2Q8NGR9 330 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 DTD1Q8TEA8 209 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 C4orf3Q8WVX3 66 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 MS4A10Q96PG2 267 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 HSD17B10Q99714 261 aaKnown RBP4.63□□□□□ -1.67
CPSF7-219ENST00000539952 MIEN1Q9BRT3 115 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 NPCDR1Q9BY65 106 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 AP5S1Q9NUS5 200 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF581Q9P0T4 197 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 FUT9Q9Y231 359 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 AMMECR1Q9Y4X0 333 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-219ENST00000539952 HERC2O95714 4834 aa4.63□□□□□ -1.67
CPSF7-219ENST00000539952 DYNC2H1Q8NCM8 4307 aaKnown RBP4.63□□□□□ -1.67
CPSF7-219ENST00000539952 KIR2DL5BA0A0G2JN68 375 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 KIR2DL5BA0A0G2JPC4 375 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 NCBP2LA6PVI3 153 aaKnown RBP4.62□□□□□ -1.67
CPSF7-219ENST00000539952 PMS2P5A8MQ11 134 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF705FA8MVS1 300 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-219ENST00000539952 C9JCJ5 164 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 FNDC10F2Z333 226 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 SLC25A17O43808 307 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 PAGE4O60829 102 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 HAND1O96004 215 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 HPRT1P00492 218 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 P0C879 139 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF705DP0CH99 300 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-219ENST00000539952 ZNF705BP0CI00 300 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-219ENST00000539952 GP9P14770 177 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 AREGP15514 252 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 CD1BP29016 333 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 RAB7AP51149 207 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 ELLP55199 621 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-219ENST00000539952 RELQ04864 619 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-219ENST00000539952 FHL3Q13643 280 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 TMEM183BQ1AE95 376 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 AARDQ4LEZ3 155 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 KIAA2026Q5HYC2 2103 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 FAM162BQ5T6X4 162 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 ACSM6Q6P461 480 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 LINC01551Q86U37 167 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 HAPLN4Q86UW8 402 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 KIR2DL5AQ8N109 375 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 TPRX1Q8N7U7 411 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 OR9G1Q8NH87 305 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 CMTM2Q8TAZ6 248 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 IL1F10Q8WWZ1 152 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 SFRP2Q96HF1 295 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 CYYR1Q96J86 154 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 UBE2E2Q96LR5 201 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 CCDC140Q96MF4 163 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 CLUHP3Q96NS8 147 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 SPATA25Q9BR10 227 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 CHRDL1Q9BU40 450 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 NPVFQ9HCQ7 196 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 IL36BQ9NZH7 164 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 WDR83OSQ9Y284 106 aa4.62□□□□□ -1.67
CPSF7-219ENST00000539952 SAA2-SAA4A0A096LPE2 208 aa4.61□□□□□ -1.67
CPSF7-219ENST00000539952 ODAMA1E959 279 aa4.61□□□□□ -1.67
CPSF7-219ENST00000539952 RBMY1BA6NDE4 496 aaKnown RBP4.61□□□□□ -1.67
CPSF7-219ENST00000539952 RBMY1EA6NEQ0 496 aaKnown RBP4.61□□□□□ -1.67
CPSF7-219ENST00000539952 LINC01548A6NM66 108 aa4.61□□□□□ -1.67
CPSF7-219ENST00000539952 J3QR06 171 aa4.61□□□□□ -1.67
CPSF7-219ENST00000539952 ITGB1BP1O14713 200 aa4.61□□□□□ -1.67
CPSF7-219ENST00000539952 OVOL1O14753 267 aa4.61□□□□□ -1.67
CPSF7-219ENST00000539952 RBFOX2O43251 390 aaKnown RBP eCLIP4.61□□□□□ -1.674e-7■□□□□ 10.3
CPSF7-219ENST00000539952 PSPNO60542 156 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms