RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 RNF5Q99942 180 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 FAM103A1Q9BTL3 118 aaKnown RBP13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 FBXL7Q9UJT9 491 aa13.59□□□□□ -0.23
PCDHB17P-201ENST00000539533 NAV3Q8IVL0 2385 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 CENPVL3A0A0U1RRI6 287 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 SAA4P35542 130 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 DSCR9P59020 149 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 KRTDAPP60985 99 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 ERHP84090 104 aaKnown RBP13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 OR4B1Q8NGF8 309 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 RNF114Q9Y508 228 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 TRBV9A0A0B4J1U6 114 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 C20orf202A1L168 122 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 ACTL6BO94805 426 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 MOSP00540 346 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 APELAP0DMC3 54 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 PRR20EP86478 221 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 PRR20CP86479 221 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 PRR20DP86480 221 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 PRR20BP86481 221 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 PRR20AP86496 221 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 CCDC144NLQ6NUI1 221 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 MIR17HGQ75NE6 70 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 OR8I2Q8N0Y5 310 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 STPG4Q8N801 248 aa13.58□□□□□ -0.24
PCDHB17P-201ENST00000539533 HELZ2Q9BYK8 2649 aaKnown RBP13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 A0A1W2PN81 502 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 REG1AP05451 166 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 SSBP2P81877 361 aaPredicted RBP13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 PLGLAQ15195 96 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 C2orf83Q53S99 150 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 HIST2H2BCQ6DN03 193 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 RNASE8Q8TDE3 154 aaKnown RBP13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 GNB1LQ9BYB4 327 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 TBL2Q9Y4P3 447 aaKnown RBP13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 APCP25054 2843 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 IGHV3OR16-10A0A075B7F0 116 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 OOSP1A8MZH6 123 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 DIRC3C9JPN6 131 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 INS-IGF2F8WCM5 200 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 NDUFB8O95169 186 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 GNG4P50150 75 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 MLANAQ16655 118 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 SPATA45Q537H7 98 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 CENPWQ5EE01 88 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
PCDHB17P-201ENST00000539533 OR5G3P0C626 314 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 LINC00869P0C866 280 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 RPL27AP46776 148 aaKnown RBP13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 HELTA6NFD8 242 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 NBR2O15453 112 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 PTTG1IPP53801 180 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 GNB4Q9HAV0 340 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 SLC45A2Q9UMX9 530 aa13.56□□□□□ -0.24
PCDHB17P-201ENST00000539533 IGLC7A0M8Q6 106 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 NPFFO15130 113 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 MSMBP08118 114 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 OR10J4P0C629 311 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 CRYBB3P26998 211 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 RBX1P62877 108 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 COTL1Q14019 142 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 Q8N976 141 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 RNF2Q99496 336 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 ZNF586Q9NXT0 402 aa13.55□□□□□ -0.24
PCDHB17P-201ENST00000539533 CCL25O15444 150 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 SLC25A16P16260 332 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 CTRLP40313 264 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 FAM120AOSQ5T036 256 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 RUSC1-AS1Q66K80 236 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 PQLC2Q6ZP29 291 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 NPBQ8NG41 125 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 TXN2Q99757 166 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 TMEM167BQ9NRX6 74 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 UQCR10Q9UDW1 63 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 NAT8BQ9UHF3 227 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 NAV2Q8IVL1 2488 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 NDUFA3O95167 84 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 ATP5IP56385 69 aaPredicted RBP13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 CX3CL1P78423 397 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 LEMD1Q68G75 181 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 Q6ZN92 141 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 C19orf35Q6ZS72 473 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 C22orf15Q8WYQ4 148 aa13.54□□□□□ -0.24
PCDHB17P-201ENST00000539533 FNDC10F2Z333 226 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 SPINK4O60575 86 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 MT-ND6P03923 174 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 GPX1P07203 203 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 HNRNPA3P51991 378 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 WDR73Q6P4I2 378 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 MAPK1IP1LQ8NDC0 245 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 RNASE7Q9H1E1 156 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 A0A096LNT2 108 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 TEX22C9J3V5 150 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 RPL19P84098 196 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 EBI3Q14213 229 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 SAPCD1Q5SSQ6 148 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 BRD3OSQ6XYD6 125 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms