RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 OR1A1Q9P1Q5 309 aa6.47□□□□□ -1.37
USP28-205ENST00000537706 IGKV1D-13A0A0B4J2D9 117 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 PIGBOS1A0A0B4J2F0 54 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 A0A1W2PPQ1 181 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 SMIM9A6NGZ8 99 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 TEX22C9J3V5 150 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 GIG44P09565 113 aaPredicted RBP6.46□□□□□ -1.37
USP28-205ENST00000537706 SAA1P0DJI8 122 aaPredicted RBP6.46□□□□□ -1.37
USP28-205ENST00000537706 IGKV1-13P0DP09 117 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 S100GP29377 79 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 KLK9Q2XQG4 91 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 SP6Q3SY56 376 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 ZNF818PQ6ZRF7 136 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 TCF24Q7RTU0 167 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 TBC1D26Q86UD7 250 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 CMTM1Q8IZ96 169 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 LHFPL5Q8TAF8 219 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 VN1R17PQ8TDU5 208 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 TMEM56Q96MV1 263 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 TP53RKQ96S44 253 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 PFDN2Q9UHV9 154 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 KLK9Q9UKQ9 250 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 OR2W1Q9Y3N9 320 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 TMEM56-RWDD3S4R434 201 aa6.46□□□□□ -1.37
USP28-205ENST00000537706 IGLV11-55A0A075B6I3 123 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 OR2T8A6NH00 312 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 TAAR5O14804 337 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 CDS2O95674 445 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 NUDT3O95989 172 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 UCP1P25874 307 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
USP28-205ENST00000537706 RELQ04864 619 aaPredicted RBP6.46□□□□□ -1.38
USP28-205ENST00000537706 C19orf35Q6ZS72 473 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 LYZL2Q7Z4W2 148 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 SLC35G3Q8N808 338 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 RBPMSQ93062 196 aaKnown RBP6.46□□□□□ -1.38
USP28-205ENST00000537706 IL22RA2Q969J5 263 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 NEU1Q99519 415 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 Q9H8V8 135 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 PLEKHA2Q9HB19 425 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 CYTL1Q9NRR1 136 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 SDHAF2Q9NX18 166 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 RBM7Q9Y580 266 aaKnown RBP6.46□□□□□ -1.38
USP28-205ENST00000537706 RFNGQ9Y644 331 aa6.46□□□□□ -1.38
USP28-205ENST00000537706 E5RGE8 158 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 K7EPK0 472 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 MBPP02686 304 aaPredicted RBP6.45□□□□□ -1.38
USP28-205ENST00000537706 DAD1P61803 113 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 EIF5AP63241 154 aaKnown RBP6.45□□□□□ -1.38
USP28-205ENST00000537706 USF2Q15853 346 aaPredicted RBP6.45□□□□□ -1.38
USP28-205ENST00000537706 TMEM268Q5VZI3 342 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 THOC7Q6I9Y2 204 aaKnown RBP6.45□□□□□ -1.38
USP28-205ENST00000537706 HSD17B13Q7Z5P4 300 aaPredicted RBP6.45□□□□□ -1.38
USP28-205ENST00000537706 CCDC28AQ8IWP9 274 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 BAP18Q8IXM2 172 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 LRRC20Q8TCA0 184 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 ATP6V0BQ99437 205 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 OR2D2Q9H210 308 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 RABAC1Q9UI14 185 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 NSG2Q9Y328 171 aa6.45□□□□□ -1.38
USP28-205ENST00000537706 SCGB1D2O95969 90 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 AREGP15514 252 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 RPL12P30050 165 aaKnown RBP6.44□□□□□ -1.38
USP28-205ENST00000537706 KRTAP10-1P60331 282 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 FAM74A1Q5RGS3 127 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 FAM222AQ5U5X8 452 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 FAM219AQ8IW50 185 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 EIF4E3Q8N5X7 224 aaKnown RBP6.44□□□□□ -1.38
USP28-205ENST00000537706 CSNK1G2-AS1Q8NCQ2 148 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 OR4D5Q8NGN0 318 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 MS4A6AQ9H2W1 248 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 CCL28Q9NRJ3 127 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 DKK2Q9UBU2 259 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 LSM5Q9Y4Y9 91 aaKnown RBP6.44□□□□□ -1.38
USP28-205ENST00000537706 NACAE9PAV3 2078 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 IGHV3OR16-8A0A075B7F1 116 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 ST8SIA3O43173 380 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 IL6RP08887 468 aaPredicted RBP6.44□□□□□ -1.38
USP28-205ENST00000537706 FGF2P09038 288 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 GCSHP23434 173 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 F2RP25116 425 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 NMSQ5H8A3 153 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 SELENOHQ8IZQ5 122 aaKnown RBP6.44□□□□□ -1.38
USP28-205ENST00000537706 MAGT1Q9H0U3 335 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 Q9H3A6 140 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 TMEM231Q9H6L2 316 aa6.44□□□□□ -1.38
USP28-205ENST00000537706 PGLYRP1O75594 196 aaPredicted RBP6.43□□□□□ -1.38
USP28-205ENST00000537706 YIF1AO95070 293 aa6.43□□□□□ -1.38
USP28-205ENST00000537706 P2RY1P47900 373 aa6.43□□□□□ -1.38
USP28-205ENST00000537706 MSMO1Q15800 293 aa6.43□□□□□ -1.38
USP28-205ENST00000537706 FAM90A2PQ658T7 463 aa6.43□□□□□ -1.38
USP28-205ENST00000537706 EIF5AL1Q6IS14 154 aaKnown RBP6.43□□□□□ -1.38
USP28-205ENST00000537706 GINS3Q9BRX5 216 aa6.43□□□□□ -1.38
USP28-205ENST00000537706 RCL1Q9Y2P8 373 aaKnown RBP6.43□□□□□ -1.38
USP28-205ENST00000537706 PRELID3BQ9Y3B1 194 aa6.43□□□□□ -1.38
USP28-205ENST00000537706 LINC00588Q9Y4M8 146 aa6.43□□□□□ -1.38
USP28-205ENST00000537706 SRRM2Q9UQ35 2752 aaKnown RBP6.43□□□□□ -1.38
USP28-205ENST00000537706 IGHV3-49A0A0A0MS15 119 aa6.42□□□□□ -1.38
USP28-205ENST00000537706 KNCNA6PVL3 124 aa6.42□□□□□ -1.38
USP28-205ENST00000537706 KRBOX1C9JBD0 128 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms