RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ITGB1BP1O14713 200 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 FKBP6O75344 327 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 SOX14O95416 240 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 MT-ND4P03905 459 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 ISG15P05161 165 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 REG1AP05451 166 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF688P0C7X2 276 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 SPART-AS1P0CW21 52 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 C8orf88P0DMB2 117 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 CTRB1P17538 263 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 MYL9P24844 172 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 DCKP27707 260 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 HLA-DMBP28068 263 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 PSMB6P28072 239 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 CCL18P55774 89 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 CXCR4P61073 352 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 SLAQ13239 276 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 KISS1Q15726 138 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 MRPL23Q16540 153 aaKnown RBP2.02□□□□□ -2.09
SNHG1-202ENST00000535689 KRTAP13-3Q3SY46 172 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 TTC32Q5I0X7 151 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 SYT6Q5T7P8 510 aaPredicted RBP2.02□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF322Q6U7Q0 402 aaPredicted RBP2.02□□□□□ -2.09
SNHG1-202ENST00000535689 ZFP2Q6ZN57 461 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 SPATA12Q7Z6I5 190 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 PDPNQ86YL7 162 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 UBAC2Q8NBM4 344 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 OR51A2Q8NGJ7 313 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 OR10J6PQ8NGY7 276 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 OR52N1Q8NH53 320 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 DEFB104AQ8WTQ1 72 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 CASTOR1Q8WTX7 329 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 MITD1Q8WV92 249 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 FAM104AQ969W3 186 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 AMELYQ99218 206 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 FGF20Q9NP95 211 aaPredicted RBP2.02□□□□□ -2.09
SNHG1-202ENST00000535689 CLN6Q9NWW5 311 aa2.02□□□□□ -2.09
SNHG1-202ENST00000535689 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 FLG2Q5D862 2391 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 IGLV2-18A0A075B6J9 118 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 IGKV1-27A0A075B6S5 117 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 IGHV3-43A0A0B4J1X8 118 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 A0A1B0GW64 132 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 TMEM223A0PJW6 202 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 A6NDN8 102 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 SMIM9A6NGZ8 99 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 K7EMT4 169 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 DNASE2O00115 360 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 CCDC22O60826 627 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 OR7C1O76099 320 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 YIF1AO95070 293 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 CA2P00918 260 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 OXTP01178 125 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 HBZP02008 142 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 CD74P04233 296 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 CD2P06729 351 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 EIF4EP06730 217 aaKnown RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 GNAO1P09471 354 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 DEFA4P12838 97 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 GTF2F2P13984 249 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 GNRHRP30968 328 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 SSTR5P35346 364 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 NUP62P37198 522 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 ETV1P50549 477 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 SNRPGP62308 76 aaKnown RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 VSNL1P62760 191 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 RHOGP84095 191 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 CDK5R1Q15078 307 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 VMA21Q3ZAQ7 101 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 TNFAIP8L3Q5GJ75 292 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 Q5VSD8 79 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 PLET1Q6UQ28 207 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF833PQ6ZTB9 187 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 MRPL55Q7Z7F7 128 aaKnown RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 APRG1Q8IVJ8 170 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 TTC9CQ8N5M4 171 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF439Q8NDP4 499 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 OR5B3Q8NH48 314 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 LYPD6BQ8NI32 183 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 GRPEL2Q8TAA5 225 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 DNAJC9Q8WXX5 260 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 EEF1AKMT3Q96AZ1 226 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 SLC29A1Q99808 456 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 APOL4Q9BPW4 351 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 FAM103A1Q9BTL3 118 aaKnown RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 REEP1Q9H902 201 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 TMEM14BQ9NUH8 114 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 ZNF257Q9Y2Q1 563 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 PUS1Q9Y606 427 aaKnown RBP eCLIP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 F11RQ9Y624 299 aaKnown RBP2.01□□□□□ -2.09
SNHG1-202ENST00000535689 DNAH2Q9P225 4427 aa2.01□□□□□ -2.09
SNHG1-202ENST00000535689 A0A0G2JND7 137 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 NBDYA0A0U1RRE5 68 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 GNGT2O14610 69 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 HSBP1O75506 76 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 RPP14O95059 124 aaKnown RBP2□□□□□ -2.09
SNHG1-202ENST00000535689 TSPAN13O95857 204 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 MAS1P04201 325 aa2□□□□□ -2.09
SNHG1-202ENST00000535689 IL4P05112 153 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms