RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 NRN1LQ496H8 165 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 PPP1R32Q7Z5V6 425 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 DUX3Q96PT4 197 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 IGHV3-64A0A075B6Q5 118 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 CFHR2P36980 270 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 LY6DQ14210 128 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 C1orf100Q5SVJ3 147 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 FAM166AQ6J272 317 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 TET1Q8NFU7 2136 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 C18orf32Q8TCD1 76 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 RALGAPA2Q2PPJ7 1873 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 CENPVL3A0A0U1RRI6 287 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 FOXI3A8MTJ6 420 aaPredicted RBP5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 WFDC11Q8NEX6 87 aa5.78□□□□□ -1.48
TGFBR3-210ENST00000533089 IGHV3OR16-8A0A075B7F1 116 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 IFI6P09912 130 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 PLNP26678 52 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 BSPH1Q075Z2 132 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 ZC2HC1BQ5TFG8 222 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 Q6ZUT4 128 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 KIR2DL4Q99706 377 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 DLL3Q9NYJ7 618 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 CCDC88CQ9P219 2028 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 TRBV6-7A0A0A0MS04 114 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 SRD5A1P18405 259 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 C20orf173Q96LM9 149 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 IGKV1-8A0A0C4DH67 115 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 A0A0U1RRA0 63 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 RPRMLQ8N4K4 120 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 OR11H6Q8NGC7 330 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 SLC25A47Q6Q0C1 308 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 MIR17HGQ75NE6 70 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 IGKV1D-33P01593 117 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 IGKV1-33P01594 117 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 C18orf12Q96KH6 178 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 ZSWIM8A7E2V4 1837 aa5.77□□□□□ -1.49
TGFBR3-210ENST00000533089 KNTC1P50748 2209 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 TNRC6AQ8NDV7 1962 aaKnown RBP5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 TRAV1-1A0A0B4J248 108 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 A0A1B0GX51 115 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 ZNRF1Q8ND25 227 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 MRPL32Q9BYC8 188 aaKnown RBP5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 DEPPQ9NTK1 212 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 MAP1BP46821 2468 aaKnown RBP5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 A0A1W2PPI3 338 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 ZXDCQ2QGD7 858 aaPredicted RBP5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 AMELYQ99218 206 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 LINC01587Q99440 93 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 WFDC6Q9BQY6 131 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 ZDBF2Q9HCK1 2354 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 DRAM1Q8N682 238 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 RNF182Q8N6D2 247 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 NEU4Q8WWR8 484 aaPredicted RBP5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 F2Z2F3 143 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 UTF1Q5T230 341 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 SIGLEC8Q9NYZ4 499 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 JPT1Q9UK76 154 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 TRGV2A0A075B6R0 118 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 ATOX1O00244 68 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 IGHV3-11P01762 117 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 C12orf74Q32Q52 190 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 FAM201AQ5SY85 155 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 MORN5Q5VZ52 161 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 HRCT1Q6UXD1 115 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 NUP35Q8NFH5 326 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 FMC1Q96HJ9 113 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 TNFRSF18Q9Y5U5 241 aa5.76□□□□□ -1.49
TGFBR3-210ENST00000533089 COL4A6Q14031 1691 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 VWC2LB2RUY7 222 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 PAPPA-AS1Q5QFB9 102 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 HERVK_113P63121 156 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 C20orf78Q9BR46 151 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 METRNQ9UJH8 293 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 IFI27P40305 119 aaPredicted RBP5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 CRYBA2P53672 197 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 CLEC19AQ6UXS0 136 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 FOXI2Q6ZQN5 318 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 Q6ZT83 130 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 FAM57AQ8TBR7 257 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 MIA3Q5JRA6 1907 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 IGHG4P01861 327 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 CD59P13987 128 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 COLCA1Q6ZS62 124 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 SSC4DQ8WTU2 575 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 LINC00527Q9UJ94 153 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 LHFPL6Q9Y693 200 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 IGHV1-24A0A0C4DH33 117 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 D6R8Y8 96 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 RFPL3SP0C7P2 107 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 LYL1P12980 280 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 RHOGP84095 191 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 TAL2Q16559 108 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 RPL39P5Q59GN2 51 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 PHLDA1Q8WV24 401 aaPredicted RBP5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 PEMTQ9UBM1 199 aa5.75□□□□□ -1.49
TGFBR3-210ENST00000533089 MGAMO43451 1857 aa5.74□□□□□ -1.49
TGFBR3-210ENST00000533089 RNASE2P10153 161 aaKnown RBP5.74□□□□□ -1.49
TGFBR3-210ENST00000533089 DAD1P61803 113 aa5.74□□□□□ -1.49
TGFBR3-210ENST00000533089 SRSF1Q07955 248 aaKnown RBP eCLIP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms