RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PSMG3Q9BT73 122 aaPredicted RBP13.44□□□□□ -0.26
CTSB-222ENST00000531551 ARV1Q9H2C2 271 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 HIGD1AQ9Y241 93 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 C2orf70A6NJV1 201 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 A8MWP6 167 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 K7EMT4 169 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 APOHP02749 345 aaPredicted RBP13.44□□□□□ -0.26
CTSB-222ENST00000531551 OR1L4Q8NGR5 311 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 TMEM37Q8WXS4 190 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 ST8SIA2Q92186 375 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 ELOVL1Q9BW60 279 aa13.44□□□□□ -0.26
CTSB-222ENST00000531551 WNK1Q9H4A3 2382 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 FOLR2P14207 255 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 PLP1P60201 277 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 C10orf113Q5VZT2 155 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 PATE2Q6UY27 113 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 STOML3Q8TAV4 291 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 NARS2Q96I59 477 aaKnown RBP13.43□□□□□ -0.26
CTSB-222ENST00000531551 DNAJC4Q9NNZ3 241 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 MRPL27Q9P0M9 148 aaKnown RBP13.43□□□□□ -0.26
CTSB-222ENST00000531551 DNHD1Q96M86 4753 aa13.43□□□□□ -0.26
CTSB-222ENST00000531551 IGHV7-4-1A0A0J9YVY3 117 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 SAP30O75446 220 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 SPP1P10451 314 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 CBLN1P23435 193 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 PXDC1Q5TGL8 231 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 PFDN5Q99471 154 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 VSIRQ9H7M9 311 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 ELOA3CA0A087WX78 387 aaPredicted RBP13.42□□□□□ -0.26
CTSB-222ENST00000531551 CRYBB3P26998 211 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 SERF2P84101 59 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 ACOT6Q3I5F7 207 aaPredicted RBP13.42□□□□□ -0.26
CTSB-222ENST00000531551 TMED6Q8WW62 240 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 SLC25A22Q9H936 323 aa13.42□□□□□ -0.26
CTSB-222ENST00000531551 SEC14L6B5MCN3 397 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 CSN3P07498 182 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 RAB2AP61019 212 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 AKR1C8PQ5T2L2 129 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 LEMD1Q68G75 181 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 IL34Q6ZMJ4 242 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 RHPN1-AS1Q9BWJ2 59 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 SLC25A39Q9BZJ4 359 aaPredicted RBP13.41□□□□□ -0.26
CTSB-222ENST00000531551 SMPXQ9UHP9 88 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 PFDN2Q9UHV9 154 aa13.41□□□□□ -0.26
CTSB-222ENST00000531551 M6PRP20645 277 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 OR10G4Q8NGN3 311 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 OR10G9Q8NGN4 311 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 OR10G7Q8NGN6 311 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 DYNLRB2Q8TF09 96 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 GATAD1Q8WUU5 269 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 SCRT1Q9BWW7 348 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 A0A1W2PS18 150 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 SEC11BP0C7V7 166 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 EIF5AL1Q6IS14 154 aaKnown RBP13.4□□□□□ -0.26
CTSB-222ENST00000531551 FAM122CQ6P4D5 195 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 ADAMTSL5Q6ZMM2 481 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 S100A7AQ86SG5 101 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 MARC2Q969Z3 335 aa13.4□□□□□ -0.26
CTSB-222ENST00000531551 SEPSECSQ9HD40 501 aaKnown RBP13.4□□□□□ -0.26
CTSB-222ENST00000531551 ZNF98A6NK75 572 aa13.39□□□□□ -0.27
CTSB-222ENST00000531551 CHEK1O14757 476 aa13.39□□□□□ -0.27
CTSB-222ENST00000531551 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTSB-222ENST00000531551 MBP02144 154 aa13.39□□□□□ -0.27
CTSB-222ENST00000531551 S100A7P31151 101 aa13.39□□□□□ -0.27
CTSB-222ENST00000531551 SPATA31B1PQ5VZV4 182 aa13.39□□□□□ -0.27
CTSB-222ENST00000531551 GRAMD2BQ96HH9 432 aa13.39□□□□□ -0.27
CTSB-222ENST00000531551 VWFP04275 2813 aa13.39□□□□□ -0.27
CTSB-222ENST00000531551 A0A1W2PPV4 95 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 H3BRN7 92 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 BUB3O43684 328 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 BMI1P35226 326 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 TMEM41BQ5BJD5 291 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 MORN5Q5VZ52 161 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 WFDC9Q8NEX5 89 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 SHANK2-AS3Q9BTD1 123 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 MLXQ9UH92 298 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 TRAV5A0A0B4J249 113 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 C8orf88P0DMB2 117 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 IGLL1P15814 213 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 RPL11P62913 178 aaKnown RBP13.38□□□□□ -0.27
CTSB-222ENST00000531551 MIR17HGQ75NE6 70 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 RNF2Q99496 336 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 TMEM231Q9H6L2 316 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 RPRMQ9NS64 109 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 U3KQE9 123 aa13.38□□□□□ -0.27
CTSB-222ENST00000531551 IGKV3-7A0A075B6H7 116 aa13.37□□□□□ -0.27
CTSB-222ENST00000531551 RHOBP62745 196 aa13.37□□□□□ -0.27
CTSB-222ENST00000531551 ALKAL2Q6UX46 152 aa13.37□□□□□ -0.27
CTSB-222ENST00000531551 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
CTSB-222ENST00000531551 FUT9Q9Y231 359 aa13.37□□□□□ -0.27
CTSB-222ENST00000531551 HMGB3O15347 200 aaKnown RBP13.36□□□□□ -0.27
CTSB-222ENST00000531551 RPP25LQ8N5L8 163 aaKnown RBP13.36□□□□□ -0.27
CTSB-222ENST00000531551 MCRIP2Q9BUT9 160 aaKnown RBP13.36□□□□□ -0.27
CTSB-222ENST00000531551 CDC34P49427 236 aaPredicted RBP13.36□□□□□ -0.27
CTSB-222ENST00000531551 FAM74A1Q5RGS3 127 aa13.36□□□□□ -0.27
CTSB-222ENST00000531551 PRR31Q5SQ13 230 aa13.36□□□□□ -0.27
CTSB-222ENST00000531551 C9orf66Q5T8R8 295 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms