RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TMEM158Q8WZ71 300 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 RND1Q92730 232 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 FAM167A-AS1Q96KT0 104 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 FAM234AQ9H0X4 552 aa6.26□□□□□ -1.41
PTPRK-219ENST00000531050 LINC00473A8K010 186 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 FXYD7P58549 80 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 C1orf61Q13536 156 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 OR1C1Q15619 314 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 MORN5Q5VZ52 161 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 LINC00596Q86U02 117 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 WDR31Q8NA23 367 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.25□□□□□ -1.41
PTPRK-219ENST00000531050 ITLN1Q8WWA0 313 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 CITED2Q99967 270 aaPredicted RBP6.25□□□□□ -1.41
PTPRK-219ENST00000531050 MLST8Q9BVC4 326 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 GFRA4Q9GZZ7 299 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 NGBQ9NPG2 151 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 LOC107984640A0A0U1RRK4 108 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 SNCGO76070 127 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 C8orf88P0DMB2 117 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 COL8A1P27658 744 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 DUTP33316 252 aaKnown RBP6.25□□□□□ -1.41
PTPRK-219ENST00000531050 GLRXP35754 106 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 GNG5P63218 68 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 UBE2L3P68036 154 aaKnown RBP6.25□□□□□ -1.41
PTPRK-219ENST00000531050 SPRNQ5BIV9 151 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 ZNF497Q6ZNH5 498 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 PPP1R27Q86WC6 154 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 SBSPONQ8IVN8 264 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 RBMXL3Q8N7X1 1067 aaKnown RBP6.25□□□□□ -1.41
PTPRK-219ENST00000531050 SGK494Q96LW2 274 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 SLC25A2Q9BXI2 301 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 MRPL32Q9BYC8 188 aaKnown RBP6.25□□□□□ -1.41
PTPRK-219ENST00000531050 ZMAT4Q9H898 229 aa6.25□□□□□ -1.41
PTPRK-219ENST00000531050 SPTY2D1-AS1A0A0U1RR47 76 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 MOSP00540 346 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 TGFAP01135 160 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 P01737 135 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 LINC00694P0DN24 101 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 ZNF32P17041 273 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 SPINK2P20155 84 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 FOXG1P55316 489 aaPredicted RBP6.24□□□□□ -1.41
PTPRK-219ENST00000531050 MAPKAPK5-AS1Q8N8E1 139 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 RASL11BQ9BPW5 248 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 CACNA1DQ01668 2161 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 EXPH5Q8NEV8 1989 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 TNRC18O15417 2968 aaPredicted RBP6.24□□□□□ -1.41
PTPRK-219ENST00000531050 PCSK5Q92824 1860 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 MED12Q93074 2177 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 TRBV7-3A0A075B6L6 115 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 HBDP02042 147 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
PTPRK-219ENST00000531050 PSMB2P49721 201 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 PSMG4Q5JS54 123 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 ZNF492Q9P255 531 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 TANC2Q9HCD6 1990 aa6.24□□□□□ -1.41
PTPRK-219ENST00000531050 IGKV1OR2-108A0A075B7D4 117 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 LOC389332A0A1B0GUA5 103 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 SHISA9B4DS77 424 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 HLA-DRB4P13762 266 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 KLF17Q5JT82 389 aaPredicted RBP6.23□□□□□ -1.41
PTPRK-219ENST00000531050 ZFP2Q6ZN57 461 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 GTSCR1Q86UQ5 136 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 GATD1Q8NB37 220 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 OR1L8Q8NGR8 309 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 SIGLEC9Q9Y336 463 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 KLF12Q9Y4X4 402 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 HLA-DRB4X5D2U9 266 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 TMSB15BA0A087X1C1 80 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 IGHV3-15A0A0B4J1V0 119 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 TRAV3A0A0B4J244 114 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 DLL1O00548 723 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 SP1P08047 785 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 CELA2AP08217 269 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 PYYP10082 97 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 ASIPP42127 132 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 WFDC3Q8IUB2 231 aa6.23□□□□□ -1.41
PTPRK-219ENST00000531050 CIARTQ8N365 385 aaPredicted RBP6.23□□□□□ -1.41
PTPRK-219ENST00000531050 RP1P56715 2156 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 RANBP2P49792 3224 aaKnown RBP6.22□□□□□ -1.41
PTPRK-219ENST00000531050 IGLV3-19P01714 112 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 MYCNOSP40205 109 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.22□□□□□ -1.41
PTPRK-219ENST00000531050 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 OR2H1Q9GZK4 316 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 COL5A1P20908 1838 aaPredicted RBP6.22□□□□□ -1.41
PTPRK-219ENST00000531050 CEP290O15078 2479 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 HEATR1Q9H583 2144 aaKnown RBP6.22□□□□□ -1.41
PTPRK-219ENST00000531050 IL4P05112 153 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 ARMS2P0C7Q2 107 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 FAM19A5Q7Z5A7 132 aaPredicted RBP6.22□□□□□ -1.41
PTPRK-219ENST00000531050 RNF138Q8WVD3 245 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 UCN2Q96RP3 112 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 C21orf62Q9NYP8 219 aa6.22□□□□□ -1.41
PTPRK-219ENST00000531050 HCFC1P51610 2035 aa6.21□□□□□ -1.41
PTPRK-219ENST00000531050 A8MWV9 139 aa6.21□□□□□ -1.42
PTPRK-219ENST00000531050 ZNHIT1O43257 154 aa6.21□□□□□ -1.42
PTPRK-219ENST00000531050 HOXA3O43365 443 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms