RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 GUSBP1Q15486 140 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 GAGE13Q4V321 117 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 C10orf55Q5SWW7 151 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 DUX3Q96PT4 197 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 SNHG12Q9BXW3 62 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 MBD3L4A6NDZ8 208 aaPredicted RBP12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 MBD3L5A6NJ08 208 aaPredicted RBP12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 Q5PR19 223 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 CYSLTR1Q9Y271 337 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 KIAA2026Q5HYC2 2103 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 GHRHP01286 108 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 RPRMLQ8N4K4 120 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 MBNL3Q9NUK0 354 aaKnown RBP12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 PTPRDP23468 1912 aa12.66□□□□□ -0.38
PCDHA4-203ENST00000530339 TRGV11A0A075B6L2 103 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 RHOGP84095 191 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 PHF3Q92576 2039 aaKnown RBP12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 PSMB11A5LHX3 300 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 D6R8Y8 96 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 M0R1W7 72 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 COLCA1Q6ZS62 124 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 A0A087X0K7 114 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 IGHV2-26A0A0B4J1V2 119 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 IGHV1-8P0DP01 117 aa12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 CHTOPQ9Y3Y2 248 aaKnown RBP12.65□□□□□ -0.38
PCDHA4-203ENST00000530339 A0A1B0GWJ7 208 aa12.65□□□□□ -0.39
PCDHA4-203ENST00000530339 TMEM178BH3BS89 294 aa12.65□□□□□ -0.39
PCDHA4-203ENST00000530339 TIMM23O14925 209 aa12.65□□□□□ -0.39
PCDHA4-203ENST00000530339 RNASE4P34096 147 aaKnown RBP12.65□□□□□ -0.39
PCDHA4-203ENST00000530339 BCL6BQ8N143 479 aaPredicted RBP12.65□□□□□ -0.39
PCDHA4-203ENST00000530339 CD177Q8N6Q3 437 aa12.65□□□□□ -0.39
PCDHA4-203ENST00000530339 NCOR1P1Q9H4R4 102 aa12.65□□□□□ -0.39
PCDHA4-203ENST00000530339 ZNF815PA8K554 130 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 C3orf36Q3SXR2 165 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 CACNA1GO43497 2377 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 SCN5AQ14524 2016 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 PMS2P5A8MQ11 134 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 EVI2AP22794 236 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 COX11Q9Y6N1 276 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 NPIPB5A8MRT5 1133 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 CD5LO43866 347 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 PSG1P11464 419 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 SELLP14151 372 aa12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 DMRTC2Q8IXT2 367 aaPredicted RBP12.64□□□□□ -0.39
PCDHA4-203ENST00000530339 EP300Q09472 2414 aaPredicted RBP12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 IFI27P40305 119 aaPredicted RBP12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 A8MWV9 139 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 LILRA1O75019 489 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 EXOC3-AS1Q8N2X6 119 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 SLC25A39Q9BZJ4 359 aaPredicted RBP12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 WNT2P09544 360 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 Q0VFX4 171 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 PAX9P55771 341 aa12.63□□□□□ -0.39
PCDHA4-203ENST00000530339 EFNA4P52798 201 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 FANCMQ8IYD8 2048 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 TPTE2P1Q5T6R2 138 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 TMEM200BQ69YZ2 307 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 VWA8A3KMH1 1905 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 ROS1P08922 2347 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 PAX8Q06710 450 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 SCRT1Q9BWW7 348 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 LYZL1Q6UWQ5 148 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 ANAPC13Q9BS18 74 aa12.62□□□□□ -0.39
PCDHA4-203ENST00000530339 ZCCHC24Q8N2G6 241 aaKnown RBP12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 IGHV1-3A0A0C4DH29 117 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 GAGE12BA1L429 117 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 LAGE3Q14657 143 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 MYLKQ15746 1914 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 A0A1W2PRX2 142 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 H0YJW9 148 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 ZNF672Q499Z4 452 aaPredicted RBP12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 MSRB2Q9Y3D2 182 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 NCR2O95944 276 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 LHFPL4Q7Z7J7 247 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 IGKV3OR2-268A0A0C4DH90 116 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 PRR31Q5SQ13 230 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 STHQ8IWL8 128 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 LINC01587Q99440 93 aa12.61□□□□□ -0.39
PCDHA4-203ENST00000530339 A0A1B0GUS0 222 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 KIR3DL3Q8N743 410 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 SIGLEC15Q6ZMC9 328 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 VOPP1Q96AW1 172 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 GAFA1Q96PS6 74 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 TRGV2A0A075B6R0 118 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 LINC00205P59089 165 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 B4DSR2 109 aa12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 PRB3Q04118 309 aaPredicted RBP12.6□□□□□ -0.39
PCDHA4-203ENST00000530339 LIME1Q9H400 295 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms