RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 ERHP84090 104 aaKnown RBP5.53□□□□□ -1.52
USP48-212ENST00000527823 CLINT1Q14677 625 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 PHLDA2Q53GA4 152 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 TMEM268Q5VZI3 342 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 C22orf42Q6IC83 251 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 H2BFWTQ7Z2G1 175 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 SLC35G3Q8N808 338 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 OR5AP2Q8NGF4 316 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 OR4B1Q8NGF8 309 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 OR4A16Q8NH70 328 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 MPLKIPQ8TAP9 179 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 BORCS5Q969J3 196 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 UHRF2Q96PU4 802 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 ZNF2Q9BSG1 426 aaPredicted RBP5.53□□□□□ -1.52
USP48-212ENST00000527823 SCPEP1Q9HB40 452 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 C8orf4Q9NR00 106 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 NDUFB11Q9NX14 153 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 DAPK2Q9UIK4 370 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 LRP2P98164 4655 aa5.53□□□□□ -1.52
USP48-212ENST00000527823 A8MTW9 85 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 ZNF705GA8MUZ8 300 aaPredicted RBP5.52□□□□□ -1.53
USP48-212ENST00000527823 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
USP48-212ENST00000527823 GPR31O00270 319 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 ATP5G1P05496 136 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 P0C879 139 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 ELK1P19419 428 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 ATP5G3P48201 142 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 HOXA1P49639 335 aaPredicted RBP5.52□□□□□ -1.53
USP48-212ENST00000527823 PSMB3P49720 205 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 ERVFC1-1P60608 527 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 PSG9Q00887 426 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 FCN2Q15485 313 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 BSXQ3C1V8 233 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 FAM78BQ5VT40 261 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 AMTNQ6UX39 209 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 OR4C16Q8NGL9 310 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 OR5H6Q8NGV6 325 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 MAGT1Q9H0U3 335 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 DUSP21Q9H596 190 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 FAM212BQ9NTI7 297 aaPredicted RBP5.52□□□□□ -1.53
USP48-212ENST00000527823 ANAPC10Q9UM13 185 aa5.52□□□□□ -1.53
USP48-212ENST00000527823 MRPS16Q9Y3D3 137 aaKnown RBP5.52□□□□□ -1.53
USP48-212ENST00000527823 TRAV18A0A075B6X5 111 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 IGLV5-39A0A0G2JS06 123 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 A0A0J9YX75 114 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 TRDV1A0A1B0GX56 115 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 CRXO43186 299 aaPredicted RBP5.51□□□□□ -1.53
USP48-212ENST00000527823 SCGB2A1O75556 95 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 IGKV1-5P01602 117 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 PSG1P11464 419 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 TNFSF8P32971 234 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 SNCAP37840 140 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 RFX2P48378 723 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 RND2P52198 227 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 DHODHQ02127 395 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 TBCEQ15813 527 aaPredicted RBP5.51□□□□□ -1.53
USP48-212ENST00000527823 SFXN4Q6P4A7 337 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 PRSS54Q6PEW0 395 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 TBC1D26Q86UD7 250 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 BAP18Q8IXM2 172 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 C10orf67Q8IYJ2 551 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 CMTM1Q8IZ96 169 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 OR1S2Q8NGQ3 325 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 COQ8AQ8NI60 647 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 IGF2BP2-AS1Q96M15 143 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 LINC00052Q96N35 136 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 TMEM208Q9BTX3 173 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 AUNIPQ9H7T9 357 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 SCN3BQ9NY72 215 aa5.51□□□□□ -1.53
USP48-212ENST00000527823 TRAV30A0A087WSZ9 112 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 TRAV26-1A0A087WT03 109 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 A0A0B4J293 547 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 M0R2Z0 102 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 EBAG9O00559 213 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 GSTZ1O43708 216 aaPredicted RBP5.5□□□□□ -1.53
USP48-212ENST00000527823 INSP01308 110 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 PMP2P02689 132 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 AZU1P20160 251 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 TSPOP30536 169 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 OR10J1P30954 320 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 RPL5P46777 297 aaKnown RBP5.5□□□□□ -1.53
USP48-212ENST00000527823 HSPA13P48723 471 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 YPEL3P61236 119 aaPredicted RBP5.5□□□□□ -1.53
USP48-212ENST00000527823 ESRGQ1W209 222 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 DHRS11Q6UWP2 260 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 OR6F1Q8NGZ6 308 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 FCGR1BQ92637 280 aa5.5□□□□□ -1.53
USP48-212ENST00000527823 A0A087WTM6 91 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 A0A0G2JRQ6 117 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 TOMM40O96008 361 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 ETV6P41212 452 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 SPINK13Q1W4C9 94 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 SERTAD4-AS1Q5TG53 156 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 SPATA31B1PQ5VZV4 182 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 PRSS48Q7RTY5 328 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 OR51G1Q8NGK1 321 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 Q8WTZ3 238 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 TMEM170AQ8WVE7 144 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 IFT46Q9NQC8 304 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 DOK5Q9P104 306 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms